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    Results: 1 to 20 of 106

    1.

    GOToolBox: functional analysis of gene datasets based on Gene Ontology.

    Martin D, Brun C, Remy E, Mouren P, Thieffry D, Jacq B.

    Genome Biol. 2004;5(12):R101. Epub 2004 Nov 26.

    PMID:
    15575967
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Atlas - a data warehouse for integrative bioinformatics.

    Shah SP, Huang Y, Xu T, Yuen MM, Ling J, Ouellette BF.

    BMC Bioinformatics. 2005 Feb 21;6:34.

    PMID:
    15723693
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    GObar: a gene ontology based analysis and visualization tool for gene sets.

    Lee JS, Katari G, Sachidanandam R.

    BMC Bioinformatics. 2005 Jul 25;6:189.

    PMID:
    16042800
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    AgBase: a unified resource for functional analysis in agriculture.

    McCarthy FM, Bridges SM, Wang N, Magee GB, Williams WP, Luthe DS, Burgess SC.

    Nucleic Acids Res. 2007 Jan;35(Database issue):D599-603. Epub 2006 Nov 29.

    PMID:
    17135208
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    GS2: an efficiently computable measure of GO-based similarity of gene sets.

    Ruths T, Ruths D, Nakhleh L.

    Bioinformatics. 2009 May 1;25(9):1178-84. Epub 2009 Mar 16.

    PMID:
    19289444
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    DynGO: a tool for visualizing and mining of Gene Ontology and its associations.

    Liu H, Hu ZZ, Wu CH.

    BMC Bioinformatics. 2005 Aug 9;6:201.

    PMID:
    16091147
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.

    Eden E, Navon R, Steinfeld I, Lipson D, Yakhini Z.

    BMC Bioinformatics. 2009 Feb 3;10:48.

    PMID:
    19192299
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    GOLEM: an interactive graph-based gene-ontology navigation and analysis tool.

    Sealfon RS, Hibbs MA, Huttenhower C, Myers CL, Troyanskaya OG.

    BMC Bioinformatics. 2006 Oct 10;7:443.

    PMID:
    17032457
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks.

    Daraselia N, Yuryev A, Egorov S, Mazo I, Ispolatov I.

    BMC Bioinformatics. 2007 Jul 10;8:243.

    PMID:
    17620146
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    GeneTools--application for functional annotation and statistical hypothesis testing.

    Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

    BMC Bioinformatics. 2006 Oct 24;7:470.

    PMID:
    17062145
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations.

    Xu Q, Shi Y, Lu Q, Zhang G, Luo Q, Li Y.

    BMC Bioinformatics. 2008;9 Suppl 1:S6.

    PMID:
    18315859
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    PlasmoDraft: a database of Plasmodium falciparum gene function predictions based on postgenomic data.

    Bréhélin L, Dufayard JF, Gascuel O.

    BMC Bioinformatics. 2008 Oct 16;9:440.

    PMID:
    18925948
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    GOing from functional genomics to biological significance.

    McCarthy FM, Bridges SM, Burgess SC.

    Cytogenet Genome Res. 2007;117(1-4):278-87.

    PMID:
    17675869
    [PubMed - indexed for MEDLINE]
    14.

    Databases of homologous gene families for comparative genomics.

    Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M, Perrière G.

    BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S3.

    PMID:
    19534752
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    FlyBase : a database for the Drosophila research community.

    Drysdale R; FlyBase Consortium.

    Methods Mol Biol. 2008;420:45-59. Review.

    PMID:
    18641940
    [PubMed - indexed for MEDLINE]
    16.

    Onto-Tools: new additions and improvements in 2006.

    Khatri P, Voichita C, Kattan K, Ansari N, Khatri A, Georgescu C, Tarca AL, Draghici S.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W206-11. Epub 2007 Jun 21.

    PMID:
    17584796
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Gene Class expression: analysis tool of Gene Ontology terms with gene expression data.

    Pereira GS, Brandão RM, Giuliatti S, Zago MA, Silva WA Jr.

    Genet Mol Res. 2006 Mar 31;5(1):108-14.

    PMID:
    16755502
    [PubMed - indexed for MEDLINE]
    Free Article
    18.

    Gene Ontology analysis in multiple gene clusters under multiple hypothesis testing framework.

    Zhong S, Xie D.

    Artif Intell Med. 2007 Oct;41(2):105-15.

    PMID:
    17913480
    [PubMed - indexed for MEDLINE]
    19.

    Multi-label literature classification based on the Gene Ontology graph.

    Jin B, Muller B, Zhai C, Lu X.

    BMC Bioinformatics. 2008 Dec 8;9:525.

    PMID:
    19063730
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    AgBase: a functional genomics resource for agriculture.

    McCarthy FM, Wang N, Magee GB, Nanduri B, Lawrence ML, Camon EB, Barrell DG, Hill DP, Dolan ME, Williams WP, Luthe DS, Bridges SM, Burgess SC.

    BMC Genomics. 2006 Sep 8;7:229.

    PMID:
    16961921
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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