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    Results: 1 to 20 of 120

    1.

    Consensus clustering and functional interpretation of gene-expression data.

    Swift S, Tucker A, Vinciotti V, Martin N, Orengo C, Liu X, Kellam P.

    Genome Biol. 2004;5(11):R94. Epub 2004 Nov 1.

    PMID:
    15535870
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    cDNA microarray analysis of bovine embryo gene expression profiles during the pre-implantation period.

    Ushizawa K, Herath CB, Kaneyama K, Shiojima S, Hirasawa A, Takahashi T, Imai K, Ochiai K, Tokunaga T, Tsunoda Y, Tsujimoto G, Hashizume K.

    Reprod Biol Endocrinol. 2004 Nov 24;2:77.

    PMID:
    15560851
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes.

    Datta S, Datta S.

    BMC Bioinformatics. 2006 Aug 31;7:397.

    PMID:
    16945146
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Adaptive quality-based clustering of gene expression profiles.

    De Smet F, Mathys J, Marchal K, Thijs G, De Moor B, Moreau Y.

    Bioinformatics. 2002 May;18(5):735-46.

    PMID:
    12050070
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Quadratic regression analysis for gene discovery and pattern recognition for non-cyclic short time-course microarray experiments.

    Liu H, Tarima S, Borders AS, Getchell TV, Getchell ML, Stromberg AJ.

    BMC Bioinformatics. 2005 Apr 25;6:106.

    PMID:
    15850479
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Mixture models with multiple levels, with application to the analysis of multifactor gene expression data.

    Jörnsten R, Keleş S.

    Biostatistics. 2008 Jul;9(3):540-54. Epub 2008 Feb 5.

    PMID:
    18256042
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    Dynamic model-based clustering for time-course gene expression data.

    Wu FX, Zhang WJ, Kusalik AJ.

    J Bioinform Comput Biol. 2005 Aug;3(4):821-36.

    PMID:
    16078363
    [PubMed - indexed for MEDLINE]
    8.

    Model-based clustering on the unit sphere with an illustration using gene expression profiles.

    Dortet-Bernadet JL, Wicker N.

    Biostatistics. 2008 Jan;9(1):66-80. Epub 2007 Apr 27.

    PMID:
    17468207
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    Rival penalized competitive learning (RPCL): a topology-determining algorithm for analyzing gene expression data.

    Nair TM, Zheng CL, Fink JL, Stuart RO, Gribskov M.

    Comput Biol Chem. 2003 Dec;27(6):565-74.

    PMID:
    14667784
    [PubMed - indexed for MEDLINE]
    10.

    Statistically based postprocessing of phylogenetic analysis by clustering.

    Stockham C, Wang LS, Warnow T.

    Bioinformatics. 2002;18 Suppl 1:S285-93.

    PMID:
    12169558
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Noise-robust soft clustering of gene expression time-course data.

    Futschik ME, Carlisle B.

    J Bioinform Comput Biol. 2005 Aug;3(4):965-88.

    PMID:
    16078370
    [PubMed - indexed for MEDLINE]
    12.

    Incorporating biological knowledge into distance-based clustering analysis of microarray gene expression data.

    Huang D, Pan W.

    Bioinformatics. 2006 May 15;22(10):1259-68. Epub 2006 Feb 24.

    PMID:
    16500932
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    Combining Pareto-optimal clusters using supervised learning for identifying co-expressed genes.

    Maulik U, Mukhopadhyay A, Bandyopadhyay S.

    BMC Bioinformatics. 2009 Jan 20;10:27.

    PMID:
    19154590
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    A simple and robust algorithm for microarray data clustering based on gene population-variance ratio metric.

    Chatterjee S, Bhattacharjee K, Konar A.

    Biotechnol J. 2009 Sep;4(9):1357-61.

    PMID:
    19579218
    [PubMed - indexed for MEDLINE]
    15.

    Clustering microarray gene expression data using weighted Chinese restaurant process.

    Qin ZS.

    Bioinformatics. 2006 Aug 15;22(16):1988-97. Epub 2006 Jun 9.

    PMID:
    16766561
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    Scoring clustering solutions by their biological relevance.

    Gat-Viks I, Sharan R, Shamir R.

    Bioinformatics. 2003 Dec 12;19(18):2381-9.

    PMID:
    14668221
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    A novel approach for discovering overlapping clusters in gene expression data.

    Ma PC, Chan KC.

    IEEE Trans Biomed Eng. 2009 Jul;56(7):1803-9. Epub 2009 Feb 20.

    PMID:
    19237334
    [PubMed - indexed for MEDLINE]
    18.

    Incorporating gene functions as priors in model-based clustering of microarray gene expression data.

    Pan W.

    Bioinformatics. 2006 Apr 1;22(7):795-801. Epub 2006 Jan 24.

    PMID:
    16434443
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    Effect of data normalization on fuzzy clustering of DNA microarray data.

    Kim SY, Lee JW, Bae JS.

    BMC Bioinformatics. 2006 Mar 14;7:134.

    PMID:
    16533412
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Clustering short time series gene expression data.

    Ernst J, Nau GJ, Bar-Joseph Z.

    Bioinformatics. 2005 Jun;21 Suppl 1:i159-68.

    PMID:
    15961453
    [PubMed - indexed for MEDLINE]
    Free Article

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