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    Results: 1 to 20 of 205

    1.

    Bioconductor: open software development for computational biology and bioinformatics.

    Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J.

    Genome Biol. 2004;5(10):R80. Epub 2004 Sep 15.

    PMID:
    15461798
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Bioconductor: an open source framework for bioinformatics and computational biology.

    Reimers M, Carey VJ.

    Methods Enzymol. 2006;411:119-34. Review.

    PMID:
    16939789
    [PubMed - indexed for MEDLINE]
    3.

    Bioinformatics software resources.

    Gilbert D.

    Brief Bioinform. 2004 Sep;5(3):300-4. Review.

    PMID:
    15383216
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    arrayQualityMetrics--a bioconductor package for quality assessment of microarray data.

    Kauffmann A, Gentleman R, Huber W.

    Bioinformatics. 2009 Feb 1;25(3):415-6. Epub 2008 Dec 23.

    PMID:
    19106121
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor.

    Sean D, Meltzer PS.

    Bioinformatics. 2007 Jul 15;23(14):1846-7. Epub 2007 May 12.

    PMID:
    17496320
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    Techview: computers and biology. Bioinformatics in the information age.

    Spengler SJ.

    Science. 2000 Feb 18;287(5456):1221, 1223. No abstract available.

    PMID:
    10712158
    [PubMed - indexed for MEDLINE]
    7.

    BIAS: Bioinformatics Integrated Application Software.

    Finak G, Godin N, Hallett M, Pepin F, Rajabi Z, Srivastava V, Tang Z.

    Bioinformatics. 2005 Apr 15;21(8):1745-6. Epub 2004 Nov 30.

    PMID:
    15572471
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    Atlas - a data warehouse for integrative bioinformatics.

    Shah SP, Huang Y, Xu T, Yuen MM, Ling J, Ouellette BF.

    BMC Bioinformatics. 2005 Feb 21;6:34.

    PMID:
    15723693
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Biopython: freely available Python tools for computational molecular biology and bioinformatics.

    Cock PJ, Antao T, Chang JT, Chapman BA, Cox CJ, Dalke A, Friedberg I, Hamelryck T, Kauff F, Wilczynski B, de Hoon MJ.

    Bioinformatics. 2009 Jun 1;25(11):1422-3. Epub 2009 Mar 20.

    PMID:
    19304878
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    CMA: a comprehensive Bioconductor package for supervised classification with high dimensional data.

    Slawski M, Daumer M, Boulesteix AL.

    BMC Bioinformatics. 2008 Oct 16;9:439.

    PMID:
    18925941
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    BioManager: the use of a bioinformatics web application as a teaching tool in undergraduate bioinformatics training.

    Cattley S, Arthur JW.

    Brief Bioinform. 2007 Nov;8(6):457-65. Epub 2007 Aug 22. Review.

    PMID:
    17715151
    [PubMed - indexed for MEDLINE]
    Free Article
    12.

    iTools: a framework for classification, categorization and integration of computational biology resources.

    Dinov ID, Rubin D, Lorensen W, Dugan J, Ma J, Murphy S, Kirschner B, Bug W, Sherman M, Floratos A, Kennedy D, Jagadish HV, Schmidt J, Athey B, Califano A, Musen M, Altman R, Kikinis R, Kohane I, Delp S, Parker DS, Toga AW.

    PLoS One. 2008 May 28;3(5):e2265.

    PMID:
    18509477
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    An object-oriented programming system for the integration of internet-based bioinformatics resources.

    Beveridge A.

    Appl Bioinformatics. 2006;5(1):29-39.

    PMID:
    16539535
    [PubMed - indexed for MEDLINE]
    14.

    Seahawk: moving beyond HTML in Web-based bioinformatics analysis.

    Gordon PM, Sensen CW.

    BMC Bioinformatics. 2007 Jun 18;8:208.

    PMID:
    17577405
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Towards a Grid infrastructure to support integrative approaches to biological research.

    Gavaghan DJ, Simpson AC, Lloyd S, Mac Randal DF, Boyd DR.

    Philos Transact A Math Phys Eng Sci. 2005 Aug 15;363(1833):1829-41.

    PMID:
    16099751
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    Automation of in-silico data analysis processes through workflow management systems.

    Romano P.

    Brief Bioinform. 2008 Jan;9(1):57-68. Epub 2007 Dec 2. Review.

    PMID:
    18056132
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    APBioNet: the Asia-Pacific regional consortium for bioinformatics.

    Ranganathan S, Subbiah S, Tan TW.

    Appl Bioinformatics. 2002;1(2):101-5.

    PMID:
    15130849
    [PubMed - indexed for MEDLINE]
    18.

    Conducting research on the web: 2007 update for the bioinformatics links directory.

    Fox JA, McMillan S, Ouellette BF.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W3-5. Epub 2007 Jun 22.

    PMID:
    17586821
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Bioclipse: an open source workbench for chemo- and bioinformatics.

    Spjuth O, Helmus T, Willighagen EL, Kuhn S, Eklund M, Wagener J, Murray-Rust P, Steinbeck C, Wikberg JE.

    BMC Bioinformatics. 2007 Feb 22;8:59.

    PMID:
    17316423
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Keeping pace with the data: 2008 update on the Bioinformatics Links Directory.

    Brazas MD, Fox JA, Brown T, McMillan S, Ouellette BF.

    Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W2-4.

    PMID:
    18586831
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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