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    Results: 1 to 20 of 171

    1.

    A comprehensive transcript index of the human genome generated using microarrays and computational approaches.

    Schadt EE, Edwards SW, GuhaThakurta D, Holder D, Ying L, Svetnik V, Leonardson A, Hart KW, Russell A, Li G, Cavet G, Castle J, McDonagh P, Kan Z, Chen R, Kasarskis A, Margarint M, Caceres RM, Johnson JM, Armour CD, Garrett-Engele PW, Tsinoremas NF, Shoemaker DD.

    Genome Biol. 2004;5(10):R73. Epub 2004 Sep 23.

    PMID:
    15461792
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.

    Emanuelsson O, Nagalakshmi U, Zheng D, Rozowsky JS, Urban AE, Du J, Lian Z, Stolc V, Weissman S, Snyder M, Gerstein MB.

    Genome Res. 2007 Jun;17(6):886-97. Epub 2006 Nov 21.

    PMID:
    17119069
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Experimental annotation of the human genome using microarray technology.

    Shoemaker DD, Schadt EE, Armour CD, He YD, Garrett-Engele P, McDonagh PD, Loerch PM, Leonardson A, Lum PY, Cavet G, Wu LF, Altschuler SJ, Edwards S, King J, Tsang JS, Schimmack G, Schelter JM, Koch J, Ziman M, Marton MJ, Li B, Cundiff P, Ward T, Castle J, Krolewski M, Meyer MR, Mao M, Burchard J, Kidd MJ, Dai H, Phillips JW, Linsley PS, Stoughton R, Scherer S, Boguski MS.

    Nature. 2001 Feb 15;409(6822):922-7.

    PMID:
    11237012
    [PubMed - indexed for MEDLINE]
    5.

    High-density rhesus macaque oligonucleotide microarray design using early-stage rhesus genome sequence information and human genome annotations.

    Wallace JC, Korth MJ, Paeper B, Proll SC, Thomas MJ, Magness CL, Iadonato SP, Nelson C, Katze MG.

    BMC Genomics. 2007 Jan 23;8:28.

    PMID:
    17244361
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

    Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

    BMC Genomics. 2006 Mar 21;7:59.

    PMID:
    16551369
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments.

    Johnson JM, Edwards S, Shoemaker D, Schadt EE.

    Trends Genet. 2005 Feb;21(2):93-102. Review.

    PMID:
    15661355
    [PubMed - indexed for MEDLINE]
    9.

    Two recombinant human interferon-beta 1a pharmaceutical preparations produce a similar transcriptional response determined using whole genome microarray analysis.

    Prync AE, Yankilevich P, Barrero PR, Bello R, Marangunich L, Vidal A, Criscuolo M, Benasayag L, Famulari AL, Domínguez RO, Kauffman MA, Diez RA.

    Int J Clin Pharmacol Ther. 2008 Feb;46(2):64-71.

    PMID:
    18218286
    [PubMed - indexed for MEDLINE]
    10.

    Whole genome transcription profiling of Anaplasma phagocytophilum in human and tick host cells by tiling array analysis.

    Nelson CM, Herron MJ, Felsheim RF, Schloeder BR, Grindle SM, Chavez AO, Kurtti TJ, Munderloh UG.

    BMC Genomics. 2008 Jul 31;9:364.

    PMID:
    18671858
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Applications of DNA tiling arrays to experimental genome annotation and regulatory pathway discovery.

    Bertone P, Gerstein M, Snyder M.

    Chromosome Res. 2005;13(3):259-74. Review.

    PMID:
    15868420
    [PubMed - indexed for MEDLINE]
    12.

    Transcriptional and post-transcriptional profile of human chromosome 21.

    Nikolaev SI, Deutsch S, Genolet R, Borel C, Parand L, Ucla C, Schütz F, Duriaux Sail G, Dupré Y, Jaquier-Gubler P, Araud T, Conne B, Descombes P, Vassalli JD, Curran J, Antonarakis SE.

    Genome Res. 2009 Aug;19(8):1471-9. Epub 2009 Jul 6.

    PMID:
    19581486
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    A gene expression map for the euchromatic genome of Drosophila melanogaster.

    Stolc V, Gauhar Z, Mason C, Halasz G, van Batenburg MF, Rifkin SA, Hua S, Herreman T, Tongprasit W, Barbano PE, Bussemaker HJ, White KP.

    Science. 2004 Oct 22;306(5696):655-60.

    PMID:
    15499012
    [PubMed - indexed for MEDLINE]
    14.

    Genome-wide transcription analyses in rice using tiling microarrays.

    Li L, Wang X, Stolc V, Li X, Zhang D, Su N, Tongprasit W, Li S, Cheng Z, Wang J, Deng XW.

    Nat Genet. 2006 Jan;38(1):124-9. Epub 2005 Dec 20.

    PMID:
    16369532
    [PubMed - indexed for MEDLINE]
    15.

    Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.

    Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, Patel S, Long J, Stern D, Tammana H, Helt G, Sementchenko V, Piccolboni A, Bekiranov S, Bailey DK, Ganesh M, Ghosh S, Bell I, Gerhard DS, Gingeras TR.

    Science. 2005 May 20;308(5725):1149-54. Epub 2005 Mar 24.

    PMID:
    15790807
    [PubMed - indexed for MEDLINE]
    16.

    Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays.

    Li L, He H, Zhang J, Wang X, Bai S, Stolc V, Tongprasit W, Young ND, Yu O, Deng XW.

    Genome Biol. 2008;9(3):R57. Epub 2008 Mar 19.

    PMID:
    18348734
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22.

    Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, Cawley S, Drenkow J, Piccolboni A, Bekiranov S, Helt G, Tammana H, Gingeras TR.

    Genome Res. 2004 Mar;14(3):331-42.

    PMID:
    14993201
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture.

    Li L, Wang X, Xia M, Stolc V, Su N, Peng Z; Waraporn Tongprasit, Li S, Wang J, Wang X, Deng XW.

    Genome Biol. 2005;6(6):R52. Epub 2005 May 27. Erratum in: Genome Biol. 2005;6(8):403. Waraporn Tongprasit [added].

    PMID:
    15960804
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome.

    Hild M, Beckmann B, Haas SA, Koch B, Solovyev V, Busold C, Fellenberg K, Boutros M, Vingron M, Sauer F, Hoheisel JD, Paro R.

    Genome Biol. 2003;5(1):R3. Epub 2003 Dec 22.

    PMID:
    14709175
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    A draft annotation and overview of the human genome.

    Wright FA, Lemon WJ, Zhao WD, Sears R, Zhuo D, Wang JP, Yang HY, Baer T, Stredney D, Spitzner J, Stutz A, Krahe R, Yuan B.

    Genome Biol. 2001;2(7):RESEARCH0025. Epub 2001 Jul 4.

    PMID:
    11516338
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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