PubMed

Chloroplast DNA rearrangements in Campanulaceae: phylogenetic utility of highly rearranged genomes.

Cosner ME, Raubeson LA, Jansen RK.

BMC Evol Biol. 2004 Aug 23;4:27.PMID: 15324459 [PubMed - indexed for MEDLINE]Related articlesFree article

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.

Jansen RK, Kaittanis C, Saski C, Lee SB, Tomkins J, Alverson AJ, Daniell H.

BMC Evol Biol. 2006 Apr 9;6:32.PMID: 16603088 [PubMed - indexed for MEDLINE]Related articlesFree article

The chloroplast genome sequence of the green alga Pseudendoclonium akinetum (Ulvophyceae) reveals unusual structural features and new insights into the branching order of chlorophyte lineages.

Pombert JF, Otis C, Lemieux C, Turmel M.

Mol Biol Evol. 2005 Sep;22(9):1903-18. Epub 2005 Jun 1.PMID: 15930151 [PubMed - indexed for MEDLINE]Related articlesFree article

Complete chloroplast genome sequence of a tree fern Alsophila spinulosa: insights into evolutionary changes in fern chloroplast genomes.

Gao L, Yi X, Yang YX, Su YJ, Wang T.

BMC Evol Biol. 2009 Jun 11;9:130.PMID: 19519899 [PubMed - indexed for MEDLINE]Related articlesFree article

The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes.

Pombert JF, Lemieux C, Turmel M.

BMC Biol. 2006 Feb 3;4:3.PMID: 16472375 [PubMed - indexed for MEDLINE]Related articlesFree article

Towards a more robust molecular phylogeny of Chinese Apiaceae subfamily Apioideae: additional evidence from nrDNA ITS and cpDNA intron (rpl16 and rps16) sequences.

Zhou J, Gong X, Downie SR, Peng H.

Mol Phylogenet Evol. 2009 Oct;53(1):56-68. Epub 2009 Jun 6.PMID: 19501179 [PubMed - indexed for MEDLINE]Related articles

A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies.

Lemieux C, Otis C, Turmel M.

BMC Biol. 2007 Jan 12;5:2.PMID: 17222354 [PubMed - indexed for MEDLINE]Related articlesFree article

Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids.

Zhu XY, Chase MW, Qiu YL, Kong HZ, Dilcher DL, Li JH, Chen ZD.

BMC Evol Biol. 2007 Nov 10;7:217.PMID: 17996110 [PubMed - indexed for MEDLINE]Related articlesFree article

Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes.

Haberle RC, Fourcade HM, Boore JL, Jansen RK.

J Mol Evol. 2008 Apr;66(4):350-61. Epub 2008 Mar 11.PMID: 18330485 [PubMed - indexed for MEDLINE]Related articles

The complete chloroplast genome sequence of Citrus sinensis (L.) Osbeck var 'Ridge Pineapple': organization and phylogenetic relationships to other angiosperms.

Bausher MG, Singh ND, Lee SB, Jansen RK, Daniell H.

BMC Plant Biol. 2006 Sep 30;6:21.PMID: 17010212 [PubMed - indexed for MEDLINE]Related articlesFree article

Chloroplast DNA sequence of the green alga Oedogonium cardiacum (Chlorophyceae): unique genome architecture, derived characters shared with the Chaetophorales and novel genes acquired through horizontal transfer.

Brouard JS, Otis C, Lemieux C, Turmel M.

BMC Genomics. 2008 Jun 16;9:290.PMID: 18558012 [PubMed - indexed for MEDLINE]Related articlesFree article

Reconstructing the history of Campanulaceae with a Bayesian approach to molecular dating and dispersal-vicariance analyses.

Roquet C, Sanmartín I, Garcia-Jacas N, Sáez L, Susanna A, Wikström N, Aldasoro JJ.

Mol Phylogenet Evol. 2009 Sep;52(3):575-87. Epub 2009 May 21.PMID: 19464379 [PubMed - indexed for MEDLINE]Related articles

Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to rbcL data do not support gnetalean affinities of angiosperms.

Goremykin V, Bobrova V, Pahnke J, Troitsky A, Antonov A, Martin W.

Mol Biol Evol. 1996 Feb;13(2):383-96.PMID: 8587503 [PubMed - indexed for MEDLINE]Related articlesFree article

The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants.

Turmel M, Otis C, Lemieux C.

Mol Biol Evol. 2006 Jun;23(6):1324-38. Epub 2006 Apr 12.PMID: 16611644 [PubMed - indexed for MEDLINE]Related articlesFree article

A molecular phylogenetic study of the Palmae (Arecaceae) based on atpB, rbcL, and 18S nrDNA sequences.

Hahn WJ.

Syst Biol. 2002 Feb;51(1):92-112.PMID: 11943094 [PubMed - indexed for MEDLINE]Related articles

Phylogenetic relationships of dennstaedtioid ferns: evidence from rbcL sequences.

Wolf PG, Soltis PS, Soltis DE.

Mol Phylogenet Evol. 1994 Dec;3(4):383-92.PMID: 7697195 [PubMed - indexed for MEDLINE]Related articles

The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences.

Gielly L, Taberlet P.

Mol Biol Evol. 1994 Sep;11(5):769-77.PMID: 7968490 [PubMed - indexed for MEDLINE]Related articles

Phylogenetic affinities of the grasses to other monocots as revealed by molecular analysis of chloroplast DNA.

Katayama H, Ogihara Y.

Curr Genet. 1996 May;29(6):572-81.PMID: 8662197 [PubMed - indexed for MEDLINE]Related articles

Phylogenetic relationships of Ruteae (Rutaceae): new evidence from the chloroplast genome and comparisons with non-molecular data.

Salvo G, Bacchetta G, Ghahremaninejad F, Conti E.

Mol Phylogenet Evol. 2008 Dec;49(3):736-48. Epub 2008 Sep 17.PMID: 18824111 [PubMed - indexed for MEDLINE]Related articles

rbcL sequence divergence and phylogenetic relationships in Saxifragaceae sensu lato.

Soltis DE, Soltis PS, Clegg MT, Durbin M.

Proc Natl Acad Sci U S A. 1990 Jun;87(12):4640-4.PMID: 2352941 [PubMed - indexed for MEDLINE]Related articlesFree article