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    Results: 1 to 20 of 107

    1.

    TXTGate: profiling gene groups with text-based information.

    Glenisson P, Coessens B, Van Vooren S, Mathys J, Moreau Y, De Moor B.

    Genome Biol. 2004;5(6):R43. Epub 2004 May 28.

    PMID:
    15186494
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Clustering gene expression data using adaptive double self-organizing map.

    Ressom H, Wang D, Natarajan P.

    Physiol Genomics. 2003 Jun 24;14(1):35-46.

    PMID:
    12672901
    [PubMed - indexed for MEDLINE]
    3.

    Comparison of vocabularies, representations and ranking algorithms for gene prioritization by text mining.

    Yu S, Van Vooren S, Tranchevent LC, De Moor B, Moreau Y.

    Bioinformatics. 2008 Aug 15;24(16):i119-25.

    PMID:
    18689812
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    Using text analysis to identify functionally coherent gene groups.

    Raychaudhuri S, Schütze H, Altman RB.

    Genome Res. 2002 Oct;12(10):1582-90.

    PMID:
    12368251
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    MeInfoText: associated gene methylation and cancer information from text mining.

    Fang YC, Huang HC, Juan HF.

    BMC Bioinformatics. 2008 Jan 14;9:22.

    PMID:
    18194557
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    CoPub Mapper: mining MEDLINE based on search term co-publication.

    Alako BT, Veldhoven A, van Baal S, Jelier R, Verhoeven S, Rullmann T, Polman J, Jenster G.

    BMC Bioinformatics. 2005 Mar 11;6:51.

    PMID:
    15760478
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Text mining biomedical literature for discovering gene-to-gene relationships: a comparative study of algorithms.

    Liu Y, Navathe SB, Civera J, Dasigi V, Ram A, Ciliax BJ, Dingledine R.

    IEEE/ACM Trans Comput Biol Bioinform. 2005 Jan-Mar;2(1):62-76.

    PMID:
    17044165
    [PubMed - indexed for MEDLINE]
    8.

    Exome sequencing takes centre stage in cancer profiling.

    Maher B.

    Nature. 2009 May 14;459(7244):146-7. No abstract available.

    PMID:
    19444175
    [PubMed - indexed for MEDLINE]
    9.

    Cerebellar development transcriptome database (CDT-DB): profiling of spatio-temporal gene expression during the postnatal development of mouse cerebellum.

    Sato A, Sekine Y, Saruta C, Nishibe H, Morita N, Sato Y, Sadakata T, Shinoda Y, Kojima T, Furuichi T.

    Neural Netw. 2008 Oct;21(8):1056-69. Epub 2008 Jun 4.

    PMID:
    18603407
    [PubMed - indexed for MEDLINE]
    10.

    DDEC: Dragon database of genes implicated in esophageal cancer.

    Essack M, Radovanovic A, Schaefer U, Schmeier S, Seshadri SV, Christoffels A, Kaur M, Bajic VB.

    BMC Cancer. 2009 Jul 6;9:219.

    PMID:
    19580656
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Atlas - a data warehouse for integrative bioinformatics.

    Shah SP, Huang Y, Xu T, Yuen MM, Ling J, Ouellette BF.

    BMC Bioinformatics. 2005 Feb 21;6:34.

    PMID:
    15723693
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Systematic quantification of gene interactions by phenotypic array analysis.

    Hartman JL 4th, Tippery NP.

    Genome Biol. 2004;5(7):R49. Epub 2004 Jun 29.

    PMID:
    15239834
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    OrthoDisease: a database of human disease orthologs.

    O'Brien KP, Westerlund I, Sonnhammer EL.

    Hum Mutat. 2004 Aug;24(2):112-9.

    PMID:
    15241792
    [PubMed - indexed for MEDLINE]
    14.

    A literature-based method for assessing the functional coherence of a gene group.

    Raychaudhuri S, Altman RB.

    Bioinformatics. 2003 Feb 12;19(3):396-401.

    PMID:
    12584126
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    A systematic library for comprehensive overexpression screens in Saccharomyces cerevisiae.

    Jones GM, Stalker J, Humphray S, West A, Cox T, Rogers J, Dunham I, Prelich G.

    Nat Methods. 2008 Mar;5(3):239-41. Epub 2008 Feb 3.

    PMID:
    18246075
    [PubMed - indexed for MEDLINE]
    16.

    Evaluation of the vector space representation in text-based gene clustering.

    Glenisson P, Antal P, Mathys J, Moreau Y, De Moor B.

    Pac Symp Biocomput. 2003:391-402.

    PMID:
    12603044
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Legume Resources: MtDB and Medicago.Org.

    Retzel EF, Johnson JE, Crow JA, Lamblin AF, Paule CE.

    Methods Mol Biol. 2007;406:261-74.

    PMID:
    18287697
    [PubMed - indexed for MEDLINE]
    18.

    MILANO--custom annotation of microarray results using automatic literature searches.

    Rubinstein R, Simon I.

    BMC Bioinformatics. 2005 Jan 20;6:12.

    PMID:
    15661078
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.

    Huang da W, Sherman BT, Tan Q, Kir J, Liu D, Bryant D, Guo Y, Stephens R, Baseler MW, Lane HC, Lempicki RA.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W169-75. Epub 2007 Jun 18.

    PMID:
    17576678
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Recursive cluster elimination (RCE) for classification and feature selection from gene expression data.

    Yousef M, Jung S, Showe LC, Showe MK.

    BMC Bioinformatics. 2007 May 2;8:144.

    PMID:
    17474999
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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