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    Results: 1 to 20 of 91

    1.

    Biological networks: from physical principles to biological insights.

    Vitkup D.

    Genome Biol. 2004;5(3):313. Epub 2004 Feb 16. No abstract available.

    PMID:
    15003113
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization.

    Xu R, Venayagamoorthy GK, Wunsch DC 2nd.

    Neural Netw. 2007 Oct;20(8):917-27. Epub 2007 Jul 22.

    PMID:
    17714912
    [PubMed - indexed for MEDLINE]
    3.

    Cell biology. Stressed cells cope with protein overload.

    Ron D.

    Science. 2006 Jul 7;313(5783):52-3. No abstract available.

    PMID:
    16825557
    [PubMed - indexed for MEDLINE]
    4.

    Towards computing with proteins.

    Unger R, Moult J.

    Proteins. 2006 Apr 1;63(1):53-64.

    PMID:
    16435369
    [PubMed - indexed for MEDLINE]
    5.

    SAM breaks its stereotype.

    Hall TM.

    Nat Struct Biol. 2003 Sep;10(9):677-9. No abstract available.

    PMID:
    12942139
    [PubMed - indexed for MEDLINE]
    6.

    The evolution of domain arrangements in proteins and interaction networks.

    Bornberg-Bauer E, Beaussart F, Kummerfeld SK, Teichmann SA, Weiner J 3rd.

    Cell Mol Life Sci. 2005 Feb;62(4):435-45. Review.

    PMID:
    15719170
    [PubMed - indexed for MEDLINE]
    7.

    Interactive three-dimensional visualization and contextual analysis of protein interaction networks.

    Ho E, Webber R, Wilkins MR.

    J Proteome Res. 2008 Jan;7(1):104-12. Epub 2007 Nov 20.

    PMID:
    18020406
    [PubMed - indexed for MEDLINE]
    8.

    A lock-and-key model for protein-protein interactions.

    Morrison JL, Breitling R, Higham DJ, Gilbert DR.

    Bioinformatics. 2006 Aug 15;22(16):2012-9. Epub 2006 Jun 20.

    PMID:
    16787977
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the Internet.

    Yang Q, Siganos G, Faloutsos M, Lonardi S.

    Comput Syst Bioinformatics Conf. 2006:299-310.

    PMID:
    17369648
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    Expression of TMEM87B interacting with the human papillomavirus type 18 E6 oncogene in the Hela cDNA library by a yeast two-hybrid system.

    Li S, Liu P, Xi L, Jiang X, Wu M, Deng D, Wei J, Zhu T, Zhou L, Wang S, Xu G, Meng L, Zhou J, Ma D.

    Oncol Rep. 2008 Aug;20(2):421-7.

    PMID:
    18636207
    [PubMed - indexed for MEDLINE]
    11.

    [Orthologue, paralogue and comparative genomics for gene network analysis].

    Kawagashira N.

    Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2909-15. Review. Japanese. No abstract available.

    PMID:
    15669275
    [PubMed - indexed for MEDLINE]
    12.

    Non-linear mapping for exploratory data analysis in functional genomics.

    Azuaje F, Wang H, Chesneau A.

    BMC Bioinformatics. 2005 Jan 20;6:13.

    PMID:
    15661072
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.

    Engelen S, Trojan LA, Sacquin-Mora S, Lavery R, Carbone A.

    PLoS Comput Biol. 2009 Jan;5(1):e1000267. Epub 2009 Jan 23.

    PMID:
    19165315
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Inventories to insights.

    Aitchison JD, Galitski T.

    J Cell Biol. 2003 May 12;161(3):465-9. Review.

    PMID:
    12743099
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    The Cartographers toolbox: building bigger and better human protein interaction networks.

    Sanderson CM.

    Brief Funct Genomic Proteomic. 2009 Jan;8(1):1-11. Epub 2009 Mar 12. Review.

    PMID:
    19282470
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.

    Li D, Li J, Ouyang S, Wang J, Wu S, Wan P, Zhu Y, Xu X, He F.

    Proteomics. 2006 Jan;6(2):456-61.

    PMID:
    16317777
    [PubMed - indexed for MEDLINE]
    17.

    Discovering protein-protein interactions.

    Ng SK, Tan SH.

    J Bioinform Comput Biol. 2004 Jan;1(4):711-41.

    PMID:
    15290761
    [PubMed - indexed for MEDLINE]
    18.

    Analyzing protein interaction networks using structural information.

    Kiel C, Beltrao P, Serrano L.

    Annu Rev Biochem. 2008;77:415-41. Review.

    PMID:
    18304007
    [PubMed - indexed for MEDLINE]
    19.

    Bridge and brick network motifs: identifying significant building blocks from complex biological systems.

    Huang CY, Cheng CY, Sun CT.

    Artif Intell Med. 2007 Oct;41(2):117-27. Epub 2007 Sep 7.

    PMID:
    17825540
    [PubMed - indexed for MEDLINE]
    20.

    A computationally guided protein-interaction screen uncovers coiled-coil interactions involved in vesicular trafficking.

    Zhang H, Chen J, Wang Y, Peng L, Dong X, Lu Y, Keating AE, Jiang T.

    J Mol Biol. 2009 Sep 11;392(1):228-41. Epub 2009 Jul 8.

    PMID:
    19591838
    [PubMed - indexed for MEDLINE]

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