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    Results: 1 to 20 of 477

    1.

    An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome.

    Hild M, Beckmann B, Haas SA, Koch B, Solovyev V, Busold C, Fellenberg K, Boutros M, Vingron M, Sauer F, Hoheisel JD, Paro R.

    Genome Biol. 2003;5(1):R3. Epub 2003 Dec 22.

    PMID:
    14709175
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis.

    Andrews J, Bouffard GG, Cheadle C, Lü J, Becker KG, Oliver B.

    Genome Res. 2000 Dec;10(12):2030-43.

    PMID:
    11116097
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Prediction of gene expression in embryonic structures of Drosophila melanogaster.

    Samsonova AA, Niranjan M, Russell S, Brazma A.

    PLoS Comput Biol. 2007 Jul;3(7):e144.

    PMID:
    17658945
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome.

    Yandell M, Bailey AM, Misra S, Shu S, Wiel C, Evans-Holm M, Celniker SE, Rubin GM.

    Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1566-71. Epub 2005 Jan 24.

    PMID:
    15668397
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Systematic determination of patterns of gene expression during Drosophila embryogenesis.

    Tomancak P, Beaton A, Weiszmann R, Kwan E, Shu S, Lewis SE, Richards S, Ashburner M, Hartenstein V, Celniker SE, Rubin GM.

    Genome Biol. 2002;3(12):RESEARCH0088. Epub 2002 Dec 23.

    PMID:
    12537577
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Ab initio gene finding in Drosophila genomic DNA.

    Salamov AA, Solovyev VV.

    Genome Res. 2000 Apr;10(4):516-22.

    PMID:
    10779491
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Genome annotation assessment in Drosophila melanogaster.

    Reese MG, Hartzell G, Harris NL, Ohler U, Abril JF, Lewis SE.

    Genome Res. 2000 Apr;10(4):483-501.

    PMID:
    10779488
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Automatic image analysis for gene expression patterns of fly embryos.

    Peng H, Long F, Zhou J, Leung G, Eisen MB, Myers EW.

    BMC Cell Biol. 2007 Jul 10;8 Suppl 1:S7.

    PMID:
    17634097
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Genome wide analysis of common and specific stress responses in adult drosophila melanogaster.

    Girardot F, Monnier V, Tricoire H.

    BMC Genomics. 2004 Sep 30;5:74.

    PMID:
    15458575
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    An efficient and high-throughput approach for experimental validation of novel human gene predictions.

    Brzoska PM, Brown C, Cassel M, Ceccardi T, Di Francisco V, Dubman A, Evans J, Fang R, Harris M, Hoover J, Hu F, Larry C, Li P, Malicdem M, Maltchenko S, Shannon M, Perkins S, Poulter K, Webster-Laig M, Xiao C, Young S, Spier G, Guegler K, Gilbert D, Samaha RR.

    Genomics. 2006 Apr;87(4):437-45. Epub 2006 Jan 9.

    PMID:
    16406193
    [PubMed - indexed for MEDLINE]
    12.

    A gene expression map for the euchromatic genome of Drosophila melanogaster.

    Stolc V, Gauhar Z, Mason C, Halasz G, van Batenburg MF, Rifkin SA, Hua S, Herreman T, Tongprasit W, Barbano PE, Bussemaker HJ, White KP.

    Science. 2004 Oct 22;306(5696):655-60.

    PMID:
    15499012
    [PubMed - indexed for MEDLINE]
    13.

    Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

    Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, Bettencourt BR, Celniker SE, de Grey AD, Drysdale RA, Harris NL, Richter J, Russo S, Schroeder AJ, Shu SQ, Stapleton M, Yamada C, Ashburner M, Gelbart WM, Rubin GM, Lewis SE.

    Genome Biol. 2002;3(12):RESEARCH0083. Epub 2002 Dec 31. Review.

    PMID:
    12537572
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Homology-based annotation yields 1,042 new candidate genes in the Drosophila melanogaster genome.

    Gopal S, Schroeder M, Pieper U, Sczyrba A, Aytekin-Kurban G, Bekiranov S, Fajardo JE, Eswar N, Sanchez R, Sali A, Gaasterland T.

    Nat Genet. 2001 Mar;27(3):337-40.

    PMID:
    11242120
    [PubMed - indexed for MEDLINE]
    15.

    Assessing the Drosophila melanogaster and Anopheles gambiae genome annotations using genome-wide sequence comparisons.

    Jaillon O, Dossat C, Eckenberg R, Eiglmeier K, Segurens B, Aury JM, Roth CW, Scarpelli C, Brey PT, Weissenbach J, Wincker P.

    Genome Res. 2003 Jul;13(7):1595-9.

    PMID:
    12840038
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Generation of p53 target database via integration of microarray and global p53 DNA-binding site analysis.

    Liu S, Mirza A, Wang L.

    Methods Mol Biol. 2004;281:33-54.

    PMID:
    15220520
    [PubMed - indexed for MEDLINE]
    17.

    Two recombinant human interferon-beta 1a pharmaceutical preparations produce a similar transcriptional response determined using whole genome microarray analysis.

    Prync AE, Yankilevich P, Barrero PR, Bello R, Marangunich L, Vidal A, Criscuolo M, Benasayag L, Famulari AL, Domínguez RO, Kauffman MA, Diez RA.

    Int J Clin Pharmacol Ther. 2008 Feb;46(2):64-71.

    PMID:
    18218286
    [PubMed - indexed for MEDLINE]
    18.

    Genome-wide identification of direct targets of the Drosophila retinal determination protein Eyeless.

    Ostrin EJ, Li Y, Hoffman K, Liu J, Wang K, Zhang L, Mardon G, Chen R.

    Genome Res. 2006 Apr;16(4):466-76. Epub 2006 Mar 13.

    PMID:
    16533912
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.

    Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, Rubin GM, Celniker SE.

    Genome Biol. 2002;3(12):RESEARCH0086. Epub 2002 Dec 30.

    PMID:
    12537575
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Using the transcriptome to annotate the genome.

    Saha S, Sparks AB, Rago C, Akmaev V, Wang CJ, Vogelstein B, Kinzler KW, Velculescu VE.

    Nat Biotechnol. 2002 May;20(5):508-12.

    PMID:
    11981567
    [PubMed - indexed for MEDLINE]

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