PubMed

Molecular phylogenetics of Trypanosomatidae: contrasting results from 18S rRNA and protein phylogenies.

Hughes AL, Piontkivska H.

Kinetoplastid Biol Dis. 2003 Oct 28;2(1):15.PMID: 14613495 [PubMed - as supplied by publisher]Free PMC ArticleFree textRelated citations

Environmental kinetoplastid-like 18S rRNA sequences and phylogenetic relationships among Trypanosomatidae: paraphyly of the genus Trypanosoma.

Piontkivska H, Hughes AL.

Mol Biochem Parasitol. 2005 Nov;144(1):94-9.PMID: 16169099 [PubMed - indexed for MEDLINE]Related citations

Molecular phylogenetics of the spider infraorder Mygalomorphae using nuclear rRNA genes (18S and 28S): conflict and agreement with the current system of classification.

Hedin M, Bond JE.

Mol Phylogenet Evol. 2006 Nov;41(2):454-71. Epub 2006 May 25.PMID: 16815045 [PubMed - indexed for MEDLINE]Related citations

Phylogenetic investigations of Antarctic notothenioid fishes (Perciformes: Notothenioidei) using complete gene sequences of the mitochondrial encoded 16S rRNA.

Near TJ, Pesavento JJ, Cheng CH.

Mol Phylogenet Evol. 2004 Sep;32(3):881-91.PMID: 15288063 [PubMed - indexed for MEDLINE]Related citations

Phylogeny of Trypanosomatidae and Bodonidae (Kinetoplastida) based on 18S rRNA: evidence for paraphyly of Trypanosoma and six other genera.

Hughes AL, Piontkivska H.

Mol Biol Evol. 2003 Apr;20(4):644-52. Epub 2003 Apr 2.PMID: 12679543 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models.

Tsagkogeorga G, Turon X, Hopcroft RR, Tilak MK, Feldstein T, Shenkar N, Loya Y, Huchon D, Douzery EJ, Delsuc F.

BMC Evol Biol. 2009 Aug 5;9:187.PMID: 19656395 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.

Jansen RK, Kaittanis C, Saski C, Lee SB, Tomkins J, Alverson AJ, Daniell H.

BMC Evol Biol. 2006 Apr 9;6:32.PMID: 16603088 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Molecular phylogenetics of the spider family Micropholcommatidae (Arachnida: Araneae) using nuclear rRNA genes (18S and 28S).

Rix MG, Harvey MS, Roberts JD.

Mol Phylogenet Evol. 2008 Mar;46(3):1031-48. Epub 2007 Nov 21.PMID: 18162409 [PubMed - indexed for MEDLINE]Related citations

Trypanosomes are monophyletic: evidence from genes for glyceraldehyde phosphate dehydrogenase and small subunit ribosomal RNA.

Hamilton PB, Stevens JR, Gaunt MW, Gidley J, Gibson WC.

Int J Parasitol. 2004 Nov;34(12):1393-404.PMID: 15542100 [PubMed - indexed for MEDLINE]Related citations

Sequence heterogeneity in the 18S rRNA gene within Theileria equi and Babesia caballi from horses in South Africa.

Bhoora R, Franssen L, Oosthuizen MC, Guthrie AJ, Zweygarth E, Penzhorn BL, Jongejan F, Collins NE.

Vet Parasitol. 2009 Feb 5;159(2):112-20. Epub 2008 Oct 11.PMID: 19019541 [PubMed - indexed for MEDLINE]Related citations

Analysis of 18S rRNA gene sequences suggests significant molecular differences between Macrodasyida and Chaetonotida (Gastrotricha).

Manylov OG, Vladychenskaya NS, Milyutina IA, Kedrova OS, Korokhov NP, Dvoryanchikov GA, Aleshin VV, Petrov NB.

Mol Phylogenet Evol. 2004 Mar;30(3):850-4.PMID: 15012964 [PubMed - indexed for MEDLINE]Related citations

A phylogenetic framework for root lesion nematodes of the genus Pratylenchus (Nematoda): Evidence from 18S and D2-D3 expansion segments of 28S ribosomal RNA genes and morphological characters.

Subbotin SA, Ragsdale EJ, Mullens T, Roberts PA, Mundo-Ocampo M, Baldwin JG.

Mol Phylogenet Evol. 2008 Aug;48(2):491-505. Epub 2008 Apr 26.PMID: 18514550 [PubMed - indexed for MEDLINE]Related citations

Reconsideration of systematic relationships within the order Euplotida (Protista, Ciliophora) using new sequences of the gene coding for small-subunit rRNA and testing the use of combined data sets to construct phylogenies of the Diophrys-complex.

Yi Z, Song W, Clamp JC, Chen Z, Gao S, Zhang Q.

Mol Phylogenet Evol. 2009 Mar;50(3):599-607. Epub 2008 Dec 14.PMID: 19121402 [PubMed - indexed for MEDLINE]Related citations

A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences.

McFadden CS, France SC, Sánchez JA, Alderslade P.

Mol Phylogenet Evol. 2006 Dec;41(3):513-27. Epub 2006 Jun 18.PMID: 16876445 [PubMed - indexed for MEDLINE]Related citations

The phylogeny of Cetartiodactyla: the importance of dense taxon sampling, missing data, and the remarkable promise of cytochrome b to provide reliable species-level phylogenies.

Agnarsson I, May-Collado LJ.

Mol Phylogenet Evol. 2008 Sep;48(3):964-85. Epub 2008 Jun 12.PMID: 18590827 [PubMed - indexed for MEDLINE]Related citations

Comparative phylogenies of the housekeeping genes atpD, infB and rpoB and the 16S rRNA gene within the Pasteurellaceae.

Christensen H, Kuhnert P, Olsen JE, Bisgaard M.

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1601-9.PMID: 15388716 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, beta-tubulin, and LSU rDNA.

Hansen K, Lobuglio KF, Pfister DH.

Mol Phylogenet Evol. 2005 Jul;36(1):1-23. Epub 2005 Apr 22.PMID: 15904853 [PubMed - indexed for MEDLINE]Related citations

A multi-gene phylogeny of Clavicipitaceae (Ascomycota, Fungi): identification of localized incongruence using a combinational bootstrap approach.

Sung GH, Sung JM, Hywel-Jones NL, Spatafora JW.

Mol Phylogenet Evol. 2007 Sep;44(3):1204-23. Epub 2007 Mar 27.PMID: 17555990 [PubMed - indexed for MEDLINE]Related citations

Molecular phylogenetics of the Pectinidae (Mollusca: Bivalvia) and effect of increased taxon sampling and outgroup selection on tree topology.

Puslednik L, Serb JM.

Mol Phylogenet Evol. 2008 Sep;48(3):1178-88. Epub 2008 May 14.PMID: 18579415 [PubMed - indexed for MEDLINE]Related citations

Genus Tetrastemma Ehrenberg, 1831 (Phylum Nemertea)--a natural group? Phylogenetic relationships inferred from partial 18S rRNA sequences.

Strand M, Sundberg P.

Mol Phylogenet Evol. 2005 Oct;37(1):144-52. Epub 2005 Mar 17.PMID: 16182152 [PubMed - indexed for MEDLINE]Related citations