PubMed

Duplication is more common among laterally transferred genes than among indigenous genes.

Hooper SD, Berg OG.

Genome Biol. 2003;4(8):R48. Epub 2003 Jul 11.PMID: 12914657 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparative genomics of gene-family size in closely related bacteria.

Pushker R, Mira A, Rodríguez-Valera F.

Genome Biol. 2004;5(4):R27. Epub 2004 Mar 18.PMID: 15059260 [PubMed - indexed for MEDLINE]Related articlesFree article

Limitations of compositional approach to identifying horizontally transferred genes.

Wang B.

J Mol Evol. 2001 Sep;53(3):244-50.PMID: 11523011 [PubMed - indexed for MEDLINE]Related articles

Predictions of gene family distributions in microbial genomes: evolution by gene duplication and modification.

Yanai I, Camacho CJ, DeLisi C.

Phys Rev Lett. 2000 Sep 18;85(12):2641-4.PMID: 10978127 [PubMed - indexed for MEDLINE]Related articles

Does gene translocation accelerate the evolution of laterally transferred genes?

Hao W, Golding GB.

Genetics. 2009 Aug;182(4):1365-75. Epub 2009 May 27.PMID: 19474197 [PubMed - indexed for MEDLINE]Related articlesFree article

Patterns of bacterial gene movement.

Hao W, Golding GB.

Mol Biol Evol. 2004 Jul;21(7):1294-307. Epub 2004 Apr 28.PMID: 15115802 [PubMed - indexed for MEDLINE]Related articlesFree article

Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome.

Kanaya S, Kinouchi M, Abe T, Kudo Y, Yamada Y, Nishi T, Mori H, Ikemura T.

Gene. 2001 Oct 3;276(1-2):89-99.PMID: 11591475 [PubMed - indexed for MEDLINE]Related articles

Wolbachia genome integrated in an insect chromosome: evolution and fate of laterally transferred endosymbiont genes.

Nikoh N, Tanaka K, Shibata F, Kondo N, Hizume M, Shimada M, Fukatsu T.

Genome Res. 2008 Feb;18(2):272-80. Epub 2007 Dec 11.PMID: 18073380 [PubMed - indexed for MEDLINE]Related articlesFree article

Archaeology and evolution of transfer RNA genes in the Escherichia coli genome.

Withers M, Wernisch L, dos Reis M.

RNA. 2006 Jun;12(6):933-42. Epub 2006 Apr 17.PMID: 16618964 [PubMed - indexed for MEDLINE]Related articlesFree article

Gene Import or Deletion: A Study of the Different Genes in Escherichia coli Strains K12 and O157:H7.

Hooper SD, Berg OG.

J Mol Evol. 2002 Dec;55(6):734-44.PMID: 12486532 [PubMed - indexed for MEDLINE]Related articles

Identification and categorization of horizontally transferred genes in prokaryotic genomes.

Shi SY, Cai XH, Ding DF.

Acta Biochim Biophys Sin (Shanghai). 2005 Aug;37(8):561-6.PMID: 16077904 [PubMed - indexed for MEDLINE]Related articlesFree article

Selfish operons: horizontal transfer may drive the evolution of gene clusters.

Lawrence JG, Roth JR.

Genetics. 1996 Aug;143(4):1843-60.PMID: 8844169 [PubMed - indexed for MEDLINE]Related articlesFree article

Speciation in Chlamydia: genomewide phylogenetic analyses identified a reliable set of acquired genes.

Ortutay C, Gáspári Z, Tóth G, Jáger E, Vida G, Orosz L, Vellai T.

J Mol Evol. 2003 Dec;57(6):672-80.PMID: 14745536 [PubMed - indexed for MEDLINE]Related articles

Uncovering rate variation of lateral gene transfer during bacterial genome evolution.

Hao W, Golding GB.

BMC Genomics. 2008 May 20;9:235. Erratum in: BMC Genomics. 2008(9):556. PMID: 18492275 [PubMed - indexed for MEDLINE]Related articlesFree article

On the nature of gene innovation: duplication patterns in microbial genomes.

Hooper SD, Berg OG.

Mol Biol Evol. 2003 Jun;20(6):945-54. Epub 2003 Apr 25.PMID: 12716994 [PubMed - indexed for MEDLINE]Related articlesFree article

High rates of lateral gene transfer are not due to false diagnosis of gene absence.

Hao W, Golding GB.

Gene. 2008 Sep 15;421(1-2):27-31. Epub 2008 Jun 14.PMID: 18601986 [PubMed - indexed for MEDLINE]Related articles

The source of laterally transferred genes in bacterial genomes.

Daubin V, Lerat E, Perrière G.

Genome Biol. 2003;4(9):R57. Epub 2003 Aug 21.PMID: 12952536 [PubMed - indexed for MEDLINE]Related articlesFree article

A new experimental approach for studying bacterial genomic island evolution identifies island genes with bacterial host-specific expression patterns.

Wilson JW, Nickerson CA.

BMC Evol Biol. 2006 Jan 5;6:2.PMID: 16396675 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli.

Mau B, Glasner JD, Darling AE, Perna NT.

Genome Biol. 2006;7(5):R44. Epub 2006 May 31.PMID: 16737554 [PubMed - indexed for MEDLINE]Related articlesFree article

A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer.

Rogers MB, Watkins RF, Harper JT, Durnford DG, Gray MW, Keeling PJ.

BMC Evol Biol. 2007 Jun 11;7:89.PMID: 17562012 [PubMed - indexed for MEDLINE]Related articlesFree article