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    Results: 1 to 20 of 134

    1.

    Statistical methods for ranking differentially expressed genes.

    Broberg P.

    Genome Biol. 2003;4(6):R41. Epub 2003 May 29.

    PMID:
    12801415
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Normal uniform mixture differential gene expression detection for cDNA microarrays.

    Dean N, Raftery AE.

    BMC Bioinformatics. 2005 Jul 12;6:173.

    PMID:
    16011807
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Ranking genes with respect to differential expression.

    Broberg P.

    Genome Biol. 2002 Aug 5;3(9):preprint0007. Epub 2002 Aug 5.

    PMID:
    12225577
    [PubMed - indexed for MEDLINE]
    4.

    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data.

    Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S.

    BMC Bioinformatics. 2005 Feb 10;6:26.

    PMID:
    15705192
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data.

    Xie Y, Pan W, Khodursky AB.

    Bioinformatics. 2005 Dec 1;21(23):4280-8. Epub 2005 Sep 27.

    PMID:
    16188930
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    A mixture model for estimating the local false discovery rate in DNA microarray analysis.

    Liao JG, Lin Y, Selvanayagam ZE, Shih WJ.

    Bioinformatics. 2004 Nov 1;20(16):2694-701. Epub 2004 May 14.

    PMID:
    15145810
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data.

    Jeffery IB, Higgins DG, Culhane AC.

    BMC Bioinformatics. 2006 Jul 26;7:359.

    PMID:
    16872483
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    A quantization method based on threshold optimization for microarray short time series.

    Di Camillo B, Sanchez-Cabo F, Toffolo G, Nair SK, Trajanoski Z, Cobelli C.

    BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S11.

    PMID:
    16351737
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Approaches to reduce false positives and false negatives in the analysis of microarray data: applications in type 1 diabetes research.

    Wu J, Lenchik NI, Gerling IC.

    BMC Genomics. 2008 Sep 16;9 Suppl 2:S12.

    PMID:
    18831777
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Differential analysis of DNA microarray gene expression data.

    Hatfield GW, Hung SP, Baldi P.

    Mol Microbiol. 2003 Feb;47(4):871-7. Review.

    PMID:
    12581345
    [PubMed - indexed for MEDLINE]
    11.

    Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data.

    Jain N, Cho H, O'Connell M, Lee JK.

    BMC Bioinformatics. 2005 Jul 22;6:187.

    PMID:
    16042779
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Comparison of small n statistical tests of differential expression applied to microarrays.

    Murie C, Woody O, Lee AY, Nadon R.

    BMC Bioinformatics. 2009 Feb 3;10:45.

    PMID:
    19192265
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Filtering for increased power for microarray data analysis.

    Hackstadt AJ, Hess AM.

    BMC Bioinformatics. 2009 Jan 8;10:11.

    PMID:
    19133141
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Comparison of false discovery rate methods in identifying genes with differential expression.

    Qian HR, Huang S.

    Genomics. 2005 Oct;86(4):495-503.

    PMID:
    16054333
    [PubMed - indexed for MEDLINE]
    15.

    Ranking analysis of microarray data: a powerful method for identifying differentially expressed genes.

    Tan YD, Fornage M, Fu YX.

    Genomics. 2006 Dec;88(6):846-54. Epub 2006 Sep 18.

    PMID:
    16979869
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Ranking analysis for identifying differentially expressed genes.

    Qi Y, Sun H, Sun Q, Pan L.

    Genomics. 2011 May;97(5):326-9. Epub 2011 Mar 22.

    PMID:
    21402142
    [PubMed - indexed for MEDLINE]
    17.

    Modified nonparametric approaches to detecting differentially expressed genes in replicated microarray experiments.

    Zhao Y, Pan W.

    Bioinformatics. 2003 Jun 12;19(9):1046-54.

    PMID:
    12801864
    [PubMed - indexed for MEDLINE]
    Free Article
    18.

    Bayesian normalization and identification for differential gene expression data.

    Zhang D, Wells MT, Smart CD, Fry WE.

    J Comput Biol. 2005 May;12(4):391-406. Review.

    PMID:
    15882138
    [PubMed - indexed for MEDLINE]
    19.

    A power law global error model for the identification of differentially expressed genes in microarray data.

    Pavelka N, Pelizzola M, Vizzardelli C, Capozzoli M, Splendiani A, Granucci F, Ricciardi-Castagnoli P.

    BMC Bioinformatics. 2004 Dec 17;5:203.

    PMID:
    15606915
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    A spline function approach for detecting differentially expressed genes in microarray data analysis.

    He W.

    Bioinformatics. 2004 Nov 22;20(17):2954-63. Epub 2004 Jun 4.

    PMID:
    15180936
    [PubMed - indexed for MEDLINE]
    Free Article

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