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    Results: 1 to 20 of 115

    1.

    Clustering gene-expression data with repeated measurements.

    Yeung KY, Medvedovic M, Bumgarner RE.

    Genome Biol. 2003;4(5):R34. Epub 2003 Apr 25.

    PMID:
    12734014
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    An approach for clustering gene expression data with error information.

    Tjaden B.

    BMC Bioinformatics. 2006 Jan 12;7:17.

    PMID:
    16409635
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Bayesian infinite mixture model based clustering of gene expression profiles.

    Medvedovic M, Sivaganesan S.

    Bioinformatics. 2002 Sep;18(9):1194-206.

    PMID:
    12217911
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    Model-based clustering and data transformations for gene expression data.

    Yeung KY, Fraley C, Murua A, Raftery AE, Ruzzo WL.

    Bioinformatics. 2001 Oct;17(10):977-87.

    PMID:
    11673243
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Judging the quality of gene expression-based clustering methods using gene annotation.

    Gibbons FD, Roth FP.

    Genome Res. 2002 Oct;12(10):1574-81.

    PMID:
    12368250
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Comparisons of graph-structure clustering methods for gene expression data.

    Fang Z, Liu L, Yang J, Luo QM, Li YX.

    Acta Biochim Biophys Sin (Shanghai). 2006 Jun;38(6):379-84.

    PMID:
    16761095
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    Clustering of gene expression data: performance and similarity analysis.

    Yin L, Huang CH, Ni J.

    BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S19.

    PMID:
    17217511
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Influence of microarrays experiments missing values on the stability of gene groups by hierarchical clustering.

    de Brevern AG, Hazout S, Malpertuy A.

    BMC Bioinformatics. 2004 Aug 23;5:114.

    PMID:
    15324460
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Decomposing gene expression into cellular processes.

    Segal E, Battle A, Koller D.

    Pac Symp Biocomput. 2003:89-100.

    PMID:
    12603020
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    Bayesian mixture model based clustering of replicated microarray data.

    Medvedovic M, Yeung KY, Bumgarner RE.

    Bioinformatics. 2004 May 22;20(8):1222-32. Epub 2004 Feb 10.

    PMID:
    14871871
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Clustering of change patterns using Fourier coefficients.

    Kim J, Kim H.

    Bioinformatics. 2008 Jan 15;24(2):184-91. Epub 2007 Nov 19.

    PMID:
    18025003
    [PubMed - indexed for MEDLINE]
    Free Article
    12.

    Visualization and evaluation of clusters for exploratory analysis of gene expression data.

    Kim JH, Kohane IS, Ohno-Machado L.

    J Biomed Inform. 2002 Feb;35(1):25-36.

    PMID:
    12415724
    [PubMed - indexed for MEDLINE]
    13.

    A neural network-based similarity index for clustering DNA microarray data.

    Sawa T, Ohno-Machado L.

    Comput Biol Med. 2003 Jan;33(1):1-15.

    PMID:
    12485626
    [PubMed - indexed for MEDLINE]
    14.

    From co-expression to co-regulation: how many microarray experiments do we need?

    Yeung KY, Medvedovic M, Bumgarner RE.

    Genome Biol. 2004;5(7):R48. Epub 2004 Jun 28.

    PMID:
    15239833
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    A latent variable model for chemogenomic profiling.

    Flaherty P, Giaever G, Kumm J, Jordan MI, Arkin AP.

    Bioinformatics. 2005 Aug 1;21(15):3286-93. Epub 2005 May 26.

    PMID:
    15919724
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    Mass distributed clustering: a new algorithm for repeated measurements in gene expression data.

    Matsumoto S, Aisaki K, Kanno J.

    Genome Inform. 2005;16(2):183-94.

    PMID:
    16901101
    [PubMed - indexed for MEDLINE]
    17.

    Including probe-level uncertainty in model-based gene expression clustering.

    Liu X, Lin KK, Andersen B, Rattray M.

    BMC Bioinformatics. 2007 Mar 21;8:98.

    PMID:
    17376221
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Information-based clustering.

    Slonim N, Atwal GS, Tkacik G, Bialek W.

    Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18297-302. Epub 2005 Dec 13.

    PMID:
    16352721
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Analysis of a Gibbs sampler method for model-based clustering of gene expression data.

    Joshi A, Van de Peer Y, Michoel T.

    Bioinformatics. 2008 Jan 15;24(2):176-83. Epub 2007 Nov 22.

    PMID:
    18033794
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Supervised cluster analysis for microarray data based on multivariate Gaussian mixture.

    Qu Y, Xu S.

    Bioinformatics. 2004 Aug 12;20(12):1905-13. Epub 2004 Mar 25.

    PMID:
    15044244
    [PubMed - indexed for MEDLINE]
    Free Article

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