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    Results: 1 to 20 of 136

    1.

    Statistical tests for differential expression in cDNA microarray experiments.

    Cui X, Churchill GA.

    Genome Biol. 2003;4(4):210. Epub 2003 Mar 17. Review.

    PMID:
    12702200
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide arrays.

    Barrera L, Benner C, Tao YC, Winzeler E, Zhou Y.

    BMC Bioinformatics. 2004 Apr 20;5:42.

    PMID:
    15099405
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Using ANOVA to analyze microarray data.

    Churchill GA.

    Biotechniques. 2004 Aug;37(2):173-5, 177. Review.

    PMID:
    15335204
    [PubMed - indexed for MEDLINE]
    4.

    Power estimation of the t test for detecting differential gene expression.

    Begun A.

    Funct Integr Genomics. 2008 May;8(2):109-13. Epub 2007 Nov 13.

    PMID:
    17999097
    [PubMed - indexed for MEDLINE]
    5.

    Microarray data analysis: a hierarchical T-test to handle heteroscedasticity.

    de Menezes RX, Boer JM, van Houwelingen HC.

    Appl Bioinformatics. 2004;3(4):229-35.

    PMID:
    15702953
    [PubMed - indexed for MEDLINE]
    6.

    Replication, variation and normalisation in microarray experiments.

    Altman N.

    Appl Bioinformatics. 2005;4(1):33-44.

    PMID:
    16000011
    [PubMed - indexed for MEDLINE]
    7.

    Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments.

    Sartor MA, Tomlinson CR, Wesselkamper SC, Sivaganesan S, Leikauf GD, Medvedovic M.

    BMC Bioinformatics. 2006 Dec 19;7:538.

    PMID:
    17177995
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Differential analysis of DNA microarray gene expression data.

    Hatfield GW, Hung SP, Baldi P.

    Mol Microbiol. 2003 Feb;47(4):871-7. Review.

    PMID:
    12581345
    [PubMed - indexed for MEDLINE]
    9.

    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data.

    Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S.

    BMC Bioinformatics. 2005 Feb 10;6:26.

    PMID:
    15705192
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Empirical comparison of tests for differential expression on simulated time series microarray experiments.

    Fischer EA, Friedman M, Markey MK.

    AMIA Annu Symp Proc. 2006:921.

    PMID:
    17238540
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Novel and simple transformation algorithm for combining microarray data sets.

    Kim KY, Ki DH, Jeong HJ, Jeung HC, Chung HC, Rha SY.

    BMC Bioinformatics. 2007 Jun 25;8:218.

    PMID:
    17588268
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Analysis of variance components in gene expression data.

    Chen JJ, Delongchamp RR, Tsai CA, Hsueh HM, Sistare F, Thompson KL, Desai VG, Fuscoe JC.

    Bioinformatics. 2004 Jun 12;20(9):1436-46. Epub 2004 Feb 12.

    PMID:
    14962916
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    Using ANOVA for gene selection from microarray studies of the nervous system.

    Pavlidis P.

    Methods. 2003 Dec;31(4):282-9.

    PMID:
    14597312
    [PubMed - indexed for MEDLINE]
    14.

    Identifying temporally differentially expressed genes through functional principal components analysis.

    Liu X, Yang MC.

    Biostatistics. 2009 Oct;10(4):667-79. Epub 2009 Jul 14.

    PMID:
    19602570
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    Exploratory differential gene expression analysis in microarray experiments with no or limited replication.

    Loguinov AV, Mian IS, Vulpe CD.

    Genome Biol. 2004;5(3):R18. Epub 2004 Mar 1.

    PMID:
    15003121
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.

    Mansourian R, Mutch DM, Antille N, Aubert J, Fogel P, Le Goff JM, Moulin J, Petrov A, Rytz A, Voegel JJ, Roberts MA.

    Bioinformatics. 2004 Nov 1;20(16):2726-37. Epub 2004 May 14.

    PMID:
    15145801
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Evaluation of experimental designs for two-color cDNA microarrays.

    Yang CW, Hsiao CF, Chou CK.

    J Comput Biol. 2005 Nov;12(9):1202-20.

    PMID:
    16305329
    [PubMed - indexed for MEDLINE]
    18.

    Identifying differentially expressed genes in cDNA microarray experiments.

    Baggerly KA, Coombes KR, Hess KR, Stivers DN, Abruzzo LV, Zhang W.

    J Comput Biol. 2001;8(6):639-59.

    PMID:
    11747617
    [PubMed - indexed for MEDLINE]
    19.

    Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA.

    Nueda MJ, Conesa A, Westerhuis JA, Hoefsloot HC, Smilde AK, Talón M, Ferrer A.

    Bioinformatics. 2007 Jul 15;23(14):1792-800. Epub 2007 May 22.

    PMID:
    17519250
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Multivariate hierarchical Bayesian model for differential gene expression analysis in microarray experiments.

    Zhao H, Chan KL, Cheng LM, Yan H.

    BMC Bioinformatics. 2008;9 Suppl 1:S9.

    PMID:
    18315862
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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