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    Results: 1 to 20 of 200

    1.

    Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

    Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, Bettencourt BR, Celniker SE, de Grey AD, Drysdale RA, Harris NL, Richter J, Russo S, Schroeder AJ, Shu SQ, Stapleton M, Yamada C, Ashburner M, Gelbart WM, Rubin GM, Lewis SE.

    Genome Biol. 2002;3(12):RESEARCH0083. Epub 2002 Dec 31. Review.

    PMID:
    12537572
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Genome annotation assessment in Drosophila melanogaster.

    Reese MG, Hartzell G, Harris NL, Ohler U, Abril JF, Lewis SE.

    Genome Res. 2000 Apr;10(4):483-501.

    PMID:
    10779488
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

    Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE.

    Genome Biol. 2002;3(12):RESEARCH0084. Epub 2002 Dec 23.

    PMID:
    12537573
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.

    Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, Rubin GM, Celniker SE.

    Genome Biol. 2002;3(12):RESEARCH0086. Epub 2002 Dec 30.

    PMID:
    12537575
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Ab initio gene finding in Drosophila genomic DNA.

    Salamov AA, Solovyev VV.

    Genome Res. 2000 Apr;10(4):516-22.

    PMID:
    10779491
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome.

    Hild M, Beckmann B, Haas SA, Koch B, Solovyev V, Busold C, Fellenberg K, Boutros M, Vingron M, Sauer F, Hoheisel JD, Paro R.

    Genome Biol. 2003;5(1):R3. Epub 2003 Dec 22.

    PMID:
    14709175
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Drosophila melanogaster: a case study of a model genomic sequence and its consequences.

    Ashburner M, Bergman CM.

    Genome Res. 2005 Dec;15(12):1661-7. Review.

    PMID:
    16339363
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    In silico identification of new secretory peptide genes in Drosophila melanogaster.

    Liu F, Baggerman G, D'Hertog W, Verleyen P, Schoofs L, Wets G.

    Mol Cell Proteomics. 2006 Mar;5(3):510-22. Epub 2005 Nov 16.

    PMID:
    16291998
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    The Drosophila melanogaster genome sequencing and annotation projects: a status report.

    Drysdale R.

    Brief Funct Genomic Proteomic. 2003 Jul;2(2):128-34. Review.

    PMID:
    15239934
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Assessing the Drosophila melanogaster and Anopheles gambiae genome annotations using genome-wide sequence comparisons.

    Jaillon O, Dossat C, Eckenberg R, Eiglmeier K, Segurens B, Aury JM, Roth CW, Scarpelli C, Brey PT, Weissenbach J, Wincker P.

    Genome Res. 2003 Jul;13(7):1595-9.

    PMID:
    12840038
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity.

    Milanesi L, Petrillo M, Sepe L, Boccia A, D'Agostino N, Passamano M, Di Nardo S, Tasco G, Casadio R, Paolella G.

    BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S20.

    PMID:
    16351747
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Identification of Drosophila MicroRNA targets.

    Stark A, Brennecke J, Russell RB, Cohen SM.

    PLoS Biol. 2003 Dec;1(3):E60. Epub 2003 Oct 13.

    PMID:
    14691535
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    A gene expression map for the euchromatic genome of Drosophila melanogaster.

    Stolc V, Gauhar Z, Mason C, Halasz G, van Batenburg MF, Rifkin SA, Hua S, Herreman T, Tongprasit W, Barbano PE, Bussemaker HJ, White KP.

    Science. 2004 Oct 22;306(5696):655-60.

    PMID:
    15499012
    [PubMed - indexed for MEDLINE]
    15.

    Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes.

    Bocs S, Danchin A, Médigue C.

    BMC Bioinformatics. 2002;3:5. Epub 2002 Feb 5.

    PMID:
    11879526
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Identification of unannotated exons of low abundance transcripts in Drosophila melanogaster and cloning of a new serine protease gene upregulated upon injury.

    Maia RM, Valente V, Cunha MA, Sousa JF, Araujo DD, Silva WA Jr, Zago MA, Dias-Neto E, Souza SJ, Simpson AJ, Monesi N, Ramos RG, Espreafico EM, Paçó-Larson ML.

    BMC Genomics. 2007 Jul 24;8:249.

    PMID:
    17650329
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis.

    Andrews J, Bouffard GG, Cheadle C, Lü J, Becker KG, Oliver B.

    Genome Res. 2000 Dec;10(12):2030-43.

    PMID:
    11116097
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome.

    Yandell M, Bailey AM, Misra S, Shu S, Wiel C, Evans-Holm M, Celniker SE, Rubin GM.

    Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1566-71. Epub 2005 Jan 24.

    PMID:
    15668397
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Homology-based annotation yields 1,042 new candidate genes in the Drosophila melanogaster genome.

    Gopal S, Schroeder M, Pieper U, Sczyrba A, Aytekin-Kurban G, Bekiranov S, Fajardo JE, Eswar N, Sanchez R, Sali A, Gaasterland T.

    Nat Genet. 2001 Mar;27(3):337-40.

    PMID:
    11242120
    [PubMed - indexed for MEDLINE]
    20.

    Predicting gene function from patterns of annotation.

    King OD, Foulger RE, Dwight SS, White JV, Roth FP.

    Genome Res. 2003 May;13(5):896-904. Epub 2003 Apr 14.

    PMID:
    12695322
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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