Warning: The NCBI web site requires JavaScript to function. more...
Long terminal repeat retrotransposons of Oryza sativa.
McCarthy EM, Liu J, Lizhi G, McDonald JF.
Genome Biol. 2002 Sep 13;3(10):RESEARCH0053. Epub 2002 Sep 13.
Related citations
Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences.
Gao L, McCarthy EM, Ganko EW, McDonald JF.
BMC Genomics. 2004 Mar 2;5(1):18.
Long terminal repeat retrotransposons of Mus musculus.
McCarthy EM, McDonald JF.
Genome Biol. 2004;5(3):R14. Epub 2004 Feb 13.
Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L.
Vitte C, Panaud O.
Mol Biol Evol. 2003 Apr;20(4):528-40. Epub 2003 Mar 5.
LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice.
Wang H, Liu JS.
BMC Genomics. 2008 Aug 10;9:382.
Retrotranspositions in orthologous regions of closely related grass species.
Du C, Swigonová Z, Messing J.
BMC Evol Biol. 2006 Aug 16;6:62.
Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice.
Ma J, Devos KM, Bennetzen JL.
Genome Res. 2004 May;14(5):860-9. Epub 2004 Apr 12.
Survey of long terminal repeat retrotransposons of domesticated silkworm (Bombyx mori).
Jin-Shan X, Qing-You X, Jun L, Guo-Qing P, Ze-Yang Z.
Insect Biochem Mol Biol. 2005 Aug;35(8):921-9.
LTR retrotransposons reveal recent extensive inter-subspecies nonreciprocal recombination in Asian cultivated rice.
Wang H, Xu Z, Yu H.
BMC Genomics. 2008 Nov 27;9:565.
Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza.
Roulin A, Piegu B, Wing RA, Panaud O.
Plant J. 2008 Mar;53(6):950-9. Epub 2007 Dec 6.
LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss.
Vitte C, Panaud O, Quesneville H.
BMC Genomics. 2007 Jul 6;8:218.
Identification of LTR retrotransposons in eukaryotic genomes: supports from structure and evolution.
Wang H, Xu Z.
Int J Bioinform Res Appl. 2009;5(4):365-77.
RetrOryza: a database of the rice LTR-retrotransposons.
Chaparro C, Guyot R, Zuccolo A, Piégu B, Panaud O.
Nucleic Acids Res. 2007 Jan;35(Database issue):D66-70. Epub 2006 Oct 28.
Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons?
Tian Z, Rizzon C, Du J, Zhu L, Bennetzen JL, Jackson SA, Gaut BS, Ma J.
Genome Res. 2009 Dec;19(12):2221-30. Epub 2009 Sep 29.
LTR_STRUC: a novel search and identification program for LTR retrotransposons.
Bioinformatics. 2003 Feb 12;19(3):362-7.
Genome-wide characterization of long terminal repeat -retrotransposons in apple reveals the differences in heterogeneity and copy number between Ty1-copia and Ty3-gypsy retrotransposons.
Sun HY, Dai HY, Zhao GL, Ma Y, Ou CQ, Li H, Li LG, Zhang ZH.
J Integr Plant Biol. 2008 Sep;50(9):1130-9.
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome.
Baucom RS, Estill JC, Leebens-Mack J, Bennetzen JL.
Genome Res. 2009 Feb;19(2):243-54. Epub 2008 Nov 24.
Non-LTR retrotransposons in fungi.
Novikova O, Fet V, Blinov A.
Funct Integr Genomics. 2009 Feb;9(1):27-42. Epub 2008 Aug 2.
Characterization of SR3 reveals abundance of non-LTR retrotransposons of the RTE clade in the genome of the human blood fluke, Schistosoma mansoni.
Laha T, Kewgrai N, Loukas A, Brindley PJ.
BMC Genomics. 2005 Nov 4;6:154.
The non-LTR retrotransposons in Ciona intestinalis: new insights into the evolution of chordate genomes.
Permanyer J, Gonzàlez-Duarte R, Albalat R.
Genome Biol. 2003;4(11):R73. Epub 2003 Oct 21.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on