PubMed

Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction).

Busti E, Bordoni R, Castiglioni B, Monciardini P, Sosio M, Donadio S, Consolandi C, Rossi Bernardi L, Battaglia C, De Bellis G.

BMC Microbiol. 2002 Sep 20;2:27.PMID: 12243651 [PubMed - indexed for MEDLINE]Related articlesFree article

A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities.

Harrington CR, Lucchini S, Ridgway KP, Wegmann U, Eaton TJ, Hinton JC, Gasson MJ, Narbad A.

BMC Microbiol. 2008 Nov 11;8:195.PMID: 19014434 [PubMed - indexed for MEDLINE]Related articlesFree article

Simultaneous discrimination between 15 fish pathogens by using 16S ribosomal DNA PCR and DNA microarrays.

Warsen AE, Krug MJ, LaFrentz S, Stanek DR, Loge FJ, Call DR.

Appl Environ Microbiol. 2004 Jul;70(7):4216-21.PMID: 15240304 [PubMed - indexed for MEDLINE]Related articlesFree article

High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment.

DeSantis TZ, Brodie EL, Moberg JP, Zubieta IX, Piceno YM, Andersen GL.

Microb Ecol. 2007 Apr;53(3):371-83. Epub 2007 Mar 2.PMID: 17334858 [PubMed - indexed for MEDLINE]Related articles

Application of COMPOCHIP microarray to investigate the bacterial communities of different composts.

Franke-Whittle IH, Knapp BA, Fuchs J, Kaufmann R, Insam H.

Microb Ecol. 2009 Apr;57(3):510-21. Epub 2008 Sep 26.PMID: 18818861 [PubMed - indexed for MEDLINE]Related articles

Detection of bacterial pathogens in municipal wastewater using an oligonucleotide microarray and real-time quantitative PCR.

Lee DY, Shannon K, Beaudette LA.

J Microbiol Methods. 2006 Jun;65(3):453-67. Epub 2005 Oct 18.PMID: 16239042 [PubMed - indexed for MEDLINE]Related articles

Comparison of membranes and glass slides for 16S rDNA array analyses of microbial communities by sequence-specific labeling of DNA probes.

Rudi K, Treimo J, Nissen H, Vegarud G.

Prep Biochem Biotechnol. 2003 Aug;33(3):197-208.PMID: 12916811 [PubMed - indexed for MEDLINE]Related articles

Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples.

Wang RF, Beggs ML, Robertson LH, Cerniglia CE.

FEMS Microbiol Lett. 2002 Aug 6;213(2):175-82.PMID: 12167534 [PubMed - indexed for MEDLINE]Related articles

Development and application of an oligonucleotide microarray for the detection of food-borne bacterial pathogens.

Wang XW, Zhang L, Jin LQ, Jin M, Shen ZQ, An S, Chao FH, Li JW.

Appl Microbiol Biotechnol. 2007 Aug;76(1):225-33. Epub 2007 May 10.PMID: 17492283 [PubMed - indexed for MEDLINE]Related articles

[Analysis of bacterial diversity of kefir grains by denaturing gradient gel electrophoresis and 16S rDNA sequencing]

Wang YY, Li HR, Jia SF, Wu ZJ, Guo BH.

Wei Sheng Wu Xue Bao. 2006 Apr;46(2):310-3. Chinese. PMID: 16736598 [PubMed - indexed for MEDLINE]Related articles

Characterisation of prototype Nurmi cultures using culture-based microbiological techniques and PCR-DGGE.

Waters SM, Murphy RA, Power RF.

Int J Food Microbiol. 2006 Aug 1;110(3):268-77. Epub 2006 Jul 11.PMID: 16814892 [PubMed - indexed for MEDLINE]Related articles

Electronic microarray analysis of 16S rDNA amplicons for bacterial detection.

Barlaan EA, Sugimori M, Furukawa S, Takeuchi K.

J Biotechnol. 2005 Jan 12;115(1):11-21.PMID: 15607221 [PubMed - indexed for MEDLINE]Related articles

Development of a universal microarray based on the ligation detection reaction and 16S rrna gene polymorphism to target diversity of cyanobacteria.

Castiglioni B, Rizzi E, Frosini A, Sivonen K, Rajaniemi P, Rantala A, Mugnai MA, Ventura S, Wilmotte A, Boutte C, Grubisic S, Balthasart P, Consolandi C, Bordoni R, Mezzelani A, Battaglia C, De Bellis G.

Appl Environ Microbiol. 2004 Dec;70(12):7161-72.PMID: 15574913 [PubMed - indexed for MEDLINE]Related articlesFree article

Sequencing-independent method to generate oligonucleotide probes targeting a variable region in bacterial 16S rRNA by PCR with detachable primers.

Bertilsson S, Cavanaugh CM, Polz MF.

Appl Environ Microbiol. 2002 Dec;68(12):6077-86.PMID: 12450831 [PubMed - indexed for MEDLINE]Related articlesFree article

Establishment and analysis of specific DNA patterns in 16S-23S rRNA gene spacer regions for differentiating different bacteria.

Shang S, Fu J, Dong G, Hong W, Du L, Yu X.

Chin Med J (Engl). 2003 Jan;116(1):129-33.PMID: 12667405 [PubMed - indexed for MEDLINE]Related articlesFree article

A heteroduplex method for detection of targeted sub-populations of bacterial communities.

Turner SJ, Saul DJ, Rodrigo AG, Lewis GD.

FEMS Microbiol Lett. 2002 Feb 19;208(1):9-13.PMID: 11934486 [PubMed - indexed for MEDLINE]Related articles

Application of oligonucleotide array technology for the rapid detection of pathogenic bacteria of foodborne infections.

Hong BX, Jiang LF, Hu YS, Fang DY, Guo HY.

J Microbiol Methods. 2004 Sep;58(3):403-11.PMID: 15279944 [PubMed - indexed for MEDLINE]Related articles

Molecular analysis of bacterial community succession during prolonged compost curing.

Danon M, Franke-Whittle IH, Insam H, Chen Y, Hadar Y.

FEMS Microbiol Ecol. 2008 Jul;65(1):133-44. Epub 2008 Jun 4.PMID: 18537836 [PubMed - indexed for MEDLINE]Related articles

Development and evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in Acid Mine Drainages and bioleaching systems.

Yin H, Cao L, Qiu G, Wang D, Kellogg L, Zhou J, Dai Z, Liu X.

J Microbiol Methods. 2007 Jul;70(1):165-78. Epub 2007 Apr 29.PMID: 17543401 [PubMed - indexed for MEDLINE]Related articles

Application of broad-range 16S rRNA PCR amplification and DGGE fingerprinting for detection of tick-infecting bacteria.

Schabereiter-Gurtner C, Lubitz W, Rölleke S.

J Microbiol Methods. 2003 Feb;52(2):251-60.PMID: 12459246 [PubMed - indexed for MEDLINE]Related articles