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    Results: 1 to 20 of 138

    1.

    PRESTA: associating promoter sequences with information on gene expression.

    Mach V.

    Genome Biol. 2002 Aug 21;3(9):research0050. Epub 2002 Aug 21.

    PMID:
    12225589
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    The Eukaryotic Promoter Database, EPD: new entry types and links to gene expression data.

    Praz V, Périer R, Bonnard C, Bucher P.

    Nucleic Acids Res. 2002 Jan 1;30(1):322-4.

    PMID:
    11752326
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    The Eukaryotic Promoter Database EPD: the impact of in silico primer extension.

    Schmid CD, Praz V, Delorenzi M, Périer R, Bucher P.

    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D82-5.

    PMID:
    14681364
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Analysis of EST-driven gene annotation in human genomic sequence.

    Bailey LC Jr, Searls DB, Overton GC.

    Genome Res. 1998 Apr;8(4):362-76.

    PMID:
    9548972
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Refined repetitive sequence searches utilizing a fast hash function and cross species information retrievals.

    Reneker J, Shyu CR.

    BMC Bioinformatics. 2005 May 3;6:111.

    PMID:
    15869708
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Collembase: a repository for springtail genomics and soil quality assessment.

    Timmermans MJ, de Boer ME, Nota B, de Boer TE, Mariën J, Klein-Lankhorst RM, van Straalen NM, Roelofs D.

    BMC Genomics. 2007 Sep 27;8:341.

    PMID:
    17900339
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    The Eukaryotic Promoter Database (EPD): recent developments.

    Périer RC, Junier T, Bonnard C, Bucher P.

    Nucleic Acids Res. 1999 Jan 1;27(1):307-9.

    PMID:
    9847211
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    GarlicESTdb: an online database and mining tool for garlic EST sequences.

    Kim DW, Jung TS, Nam SH, Kwon HR, Kim A, Chae SH, Choi SH, Kim DW, Kim RN, Park HS.

    BMC Plant Biol. 2009 May 18;9:61.

    PMID:
    19445732
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    A multistep bioinformatic approach detects putative regulatory elements in gene promoters.

    Bortoluzzi S, Coppe A, Bisognin A, Pizzi C, Danieli GA.

    BMC Bioinformatics. 2005 May 18;6:121.

    PMID:
    15904489
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    GeneNotes--a novel information management software for biologists.

    Hong P, Wong WH.

    BMC Bioinformatics. 2005 Feb 1;6:20.

    PMID:
    15686593
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    ESTuber db: an online database for Tuber borchii EST sequences.

    Lazzari B, Caprera A, Cosentino C, Stella A, Milanesi L, Viotti A.

    BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S13.

    PMID:
    17430557
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration.

    Forment J, Gilabert F, Robles A, Conejero V, Nuez F, Blanca JM.

    BMC Bioinformatics. 2008 Jan 7;9:5.

    PMID:
    18179701
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome.

    Kim HJ, Baek KH, Lee SW, Kim J, Lee BW, Cho HS, Kim WT, Choi D, Hur CG.

    BMC Plant Biol. 2008 Oct 9;8:101.

    PMID:
    18844979
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    GO-Diff: mining functional differentiation between EST-based transcriptomes.

    Chen Z, Wang W, Ling XB, Liu JJ, Chen L.

    BMC Bioinformatics. 2006 Feb 16;7:72.

    PMID:
    16480524
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    The eukaryotic promoter database (EPD).

    Périer RC, Praz V, Junier T, Bonnard C, Bucher P.

    Nucleic Acids Res. 2000 Jan 1;28(1):302-3.

    PMID:
    10592254
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries.

    Keime C, Damiola F, Mouchiroud D, Duret L, Gandrillon O.

    BMC Bioinformatics. 2004 Oct 6;5:143.

    PMID:
    15469608
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    EST-PAGE--managing and analyzing EST data.

    Matukumalli LK, Grefenstette JJ, Sonstegard TS, Van Tassell CP.

    Bioinformatics. 2004 Jan 22;20(2):286-8.

    PMID:
    14734326
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    Design and assessment of a fast algorithm for identifying specific probes for human and mouse genes.

    Chang PC, Peck K.

    Bioinformatics. 2003 Jul 22;19(11):1311-7.

    PMID:
    12874041
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    2HAPI: a microarray data analysis system.

    Fink JL, Drewes S, Patel H, Welsh JB, Masys DR, Corbeil J, Gribskov M.

    Bioinformatics. 2003 Jul 22;19(11):1443-5.

    PMID:
    12874061
    [PubMed - indexed for MEDLINE]
    Free Article

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