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    Results: 1 to 20 of 171

    1.

    Permutation-validated principal components analysis of microarray data.

    Landgrebe J, Wurst W, Welzl G.

    Genome Biol. 2002;3(4):RESEARCH0019. Epub 2002 Mar 22.

    PMID:
    11983060
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Microarray data analysis: a practical approach for selecting differentially expressed genes.

    Mutch DM, Berger A, Mansourian R, Rytz A, Roberts MA.

    Genome Biol. 2001;2(12):PREPRINT0009. Epub 2001 Nov 16.

    PMID:
    11790248
    [PubMed - indexed for MEDLINE]
    3.

    Interpretation of ANOVA models for microarray data using PCA.

    de Haan JR, Wehrens R, Bauerschmidt S, Piek E, van Schaik RC, Buydens LM.

    Bioinformatics. 2007 Jan 15;23(2):184-90. Epub 2006 Nov 14.

    PMID:
    17105717
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    Analysis of strain and regional variation in gene expression in mouse brain.

    Pavlidis P, Noble WS.

    Genome Biol. 2001;2(10):RESEARCH0042. Epub 2001 Sep 27.

    PMID:
    11597334
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A unified framework for finding differentially expressed genes from microarray experiments.

    Shaik JS, Yeasin M.

    BMC Bioinformatics. 2007 Sep 18;8:347.

    PMID:
    17877806
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    A framework to identify physiological responses in microarray-based gene expression studies: selection and interpretation of biologically relevant genes.

    Rodenburg W, Heidema AG, Boer JM, Bovee-Oudenhoven IM, Feskens EJ, Mariman EC, Keijer J.

    Physiol Genomics. 2008 Mar 14;33(1):78-90. Epub 2007 Dec 27.

    PMID:
    18162501
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    Group testing for pathway analysis improves comparability of different microarray datasets.

    Manoli T, Gretz N, Gröne HJ, Kenzelmann M, Eils R, Brors B.

    Bioinformatics. 2006 Oct 15;22(20):2500-6. Epub 2006 Aug 7.

    PMID:
    16895928
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    A multivariate approach applied to microarray data for identification of genes with cell cycle-coupled transcription.

    Johansson D, Lindgren P, Berglund A.

    Bioinformatics. 2003 Mar 1;19(4):467-73.

    PMID:
    12611801
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    Mining gene expression data by interpreting principal components.

    Roden JC, King BW, Trout D, Mortazavi A, Wold BJ, Hart CE.

    BMC Bioinformatics. 2006 Apr 7;7:194.

    PMID:
    16600052
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.

    Mansourian R, Mutch DM, Antille N, Aubert J, Fogel P, Le Goff JM, Moulin J, Petrov A, Rytz A, Voegel JJ, Roberts MA.

    Bioinformatics. 2004 Nov 1;20(16):2726-37. Epub 2004 May 14.

    PMID:
    15145801
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

    Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

    BMC Genomics. 2006 Mar 21;7:59.

    PMID:
    16551369
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Evaluation of gene importance in microarray data based upon probability of selection.

    Fu LM, Fu-Liu CS.

    BMC Bioinformatics. 2005 Mar 22;6:67.

    PMID:
    15784140
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Biologically valid linear factor models of gene expression.

    Girolami M, Breitling R.

    Bioinformatics. 2004 Nov 22;20(17):3021-33. Epub 2004 Jun 16.

    PMID:
    15201181
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    Methods for evaluating gene expression from Affymetrix microarray datasets.

    Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.

    BMC Bioinformatics. 2008 Jun 17;9:284.

    PMID:
    18559105
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Bayesian hierarchical error model for analysis of gene expression data.

    Cho H, Lee JK.

    Bioinformatics. 2004 Sep 1;20(13):2016-25. Epub 2004 Mar 25.

    PMID:
    15044230
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data.

    Jonnalagadda S, Srinivasan R.

    BMC Bioinformatics. 2008 Jun 6;9:267.

    PMID:
    18534040
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Construction of null statistics in permutation-based multiple testing for multi-factorial microarray experiments.

    Gao X.

    Bioinformatics. 2006 Jun 15;22(12):1486-94. Epub 2006 Mar 30.

    PMID:
    16574697
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    Analysis of variance components in gene expression data.

    Chen JJ, Delongchamp RR, Tsai CA, Hsueh HM, Sistare F, Thompson KL, Desai VG, Fuscoe JC.

    Bioinformatics. 2004 Jun 12;20(9):1436-46. Epub 2004 Feb 12.

    PMID:
    14962916
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation.

    Comander J, Natarajan S, Gimbrone MA Jr, García-Cardeña G.

    BMC Genomics. 2004 Feb 27;5(1):17.

    PMID:
    15113402
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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