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    Results: 1 to 20 of 144

    1.

    'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns.

    Hastie T, Tibshirani R, Eisen MB, Alizadeh A, Levy R, Staudt L, Chan WC, Botstein D, Brown P.

    Genome Biol. 2000;1(2):RESEARCH0003. Epub 2000 Aug 4.

    PMID:
    11178228
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study.

    Wang J, Delabie J, Aasheim H, Smeland E, Myklebost O.

    BMC Bioinformatics. 2002 Nov 24;3:36. Epub 2002 Nov 24.

    PMID:
    12445336
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Mining gene expression data by interpreting principal components.

    Roden JC, King BW, Trout D, Mortazavi A, Wold BJ, Hart CE.

    BMC Bioinformatics. 2006 Apr 7;7:194.

    PMID:
    16600052
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Cluster stability scores for microarray data in cancer studies.

    Smolkin M, Ghosh D.

    BMC Bioinformatics. 2003 Sep 6;4:36. Epub 2003 Sep 6.

    PMID:
    12959646
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Algorithmic fusion of gene expression profiling for diffuse large B-cell lymphoma outcome prediction.

    Zhu Q, Cui H, Cao K, Chan WC.

    IEEE Trans Inf Technol Biomed. 2004 Jun;8(2):79-88.

    PMID:
    15217252
    [PubMed - indexed for MEDLINE]
    6.

    A gene expression-based method to diagnose clinically distinct subgroups of diffuse large B cell lymphoma.

    Wright G, Tan B, Rosenwald A, Hurt EH, Wiestner A, Staudt LM.

    Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9991-6. Epub 2003 Aug 4.

    PMID:
    12900505
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes.

    Datta S, Datta S.

    BMC Bioinformatics. 2006 Aug 31;7:397.

    PMID:
    16945146
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Iterative class discovery and feature selection using Minimal Spanning Trees.

    Varma S, Simon R.

    BMC Bioinformatics. 2004 Sep 8;5:126.

    PMID:
    15355552
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Combining Pareto-optimal clusters using supervised learning for identifying co-expressed genes.

    Maulik U, Mukhopadhyay A, Bandyopadhyay S.

    BMC Bioinformatics. 2009 Jan 20;10:27.

    PMID:
    19154590
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    DNA microarray data and contextual analysis of correlation graphs.

    Rougemont J, Hingamp P.

    BMC Bioinformatics. 2003 Apr 29;4:15. Epub 2003 Apr 29.

    PMID:
    12720549
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Clinical quantitation of diagnostic and predictive gene expression levels in follicular and diffuse large B-cell lymphoma by RT-PCR gene expression profiling.

    Sakhinia E, Glennie C, Hoyland JA, Menasce LP, Brady G, Miller C, Radford JA, Byers RJ.

    Blood. 2007 May 1;109(9):3922-8. Epub 2007 Jan 25.

    PMID:
    17255358
    [PubMed - indexed for MEDLINE]
    Free Article
    12.

    Effect of data normalization on fuzzy clustering of DNA microarray data.

    Kim SY, Lee JW, Bae JS.

    BMC Bioinformatics. 2006 Mar 14;7:134.

    PMID:
    16533412
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.

    Carmona-Saez P, Pascual-Marqui RD, Tirado F, Carazo JM, Pascual-Montano A.

    BMC Bioinformatics. 2006 Feb 17;7:78.

    PMID:
    16503973
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    K-ary clustering with optimal leaf ordering for gene expression data.

    Bar-Joseph Z, Demaine ED, Gifford DK, Srebro N, Hamel AM, Jaakkola TS.

    Bioinformatics. 2003 Jun 12;19(9):1070-8.

    PMID:
    12801867
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    Reliable classification of two-class cancer data using evolutionary algorithms.

    Deb K, Raji Reddy A.

    Biosystems. 2003 Nov;72(1-2):111-29.

    PMID:
    14642662
    [PubMed - indexed for MEDLINE]
    16.

    Supervised clustering of genes.

    Dettling M, Bühlmann P.

    Genome Biol. 2002;3(12):RESEARCH0069. Epub 2002 Nov 25.

    PMID:
    12537558
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    NIFTI: an evolutionary approach for finding number of clusters in microarray data.

    Jonnalagadda S, Srinivasan R.

    BMC Bioinformatics. 2009 Jan 30;10:40.

    PMID:
    19178750
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Prediction of survival in diffuse large-B-cell lymphoma based on the expression of six genes.

    Lossos IS, Czerwinski DK, Alizadeh AA, Wechser MA, Tibshirani R, Botstein D, Levy R.

    N Engl J Med. 2004 Apr 29;350(18):1828-37.

    PMID:
    15115829
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    Identifying superficial, muscle-invasive, and metastasizing transitional cell carcinoma of the bladder: use of cDNA array analysis of gene expression profiles.

    Modlich O, Prisack HB, Pitschke G, Ramp U, Ackermann R, Bojar H, Vögeli TA, Grimm MO.

    Clin Cancer Res. 2004 May 15;10(10):3410-21.

    PMID:
    15161696
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Microarrays--identifying molecular portraits for prostate tumors with different Gleason patterns.

    Mendes A, Scott RJ, Moscato P.

    Methods Mol Med. 2008;141:131-51. Review.

    PMID:
    18453088
    [PubMed - indexed for MEDLINE]

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