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    AT3G21480 BRCT domain-containing DNA repair protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821702, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT3G21480
    Gene description
    BRCT domain-containing DNA repair protein
    Primary source
    Araport:AT3G21480
    Locus tag
    AT3G21480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (7567565..7572202)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tRNA-Pro Neighboring gene miscRNA Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate synthase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_113043.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BRCT domain-containing DNA repair protein
    NP_188785.2
    • BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7567565..7572202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113043.3 → NP_188785.2  BRCT domain-containing DNA repair protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188785.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDR7, Q9LVF7
      Conserved Domains (1) summary
      smart00292
      Location:819 → 882
      BRCT; breast cancer carboxy-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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