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    GLIS2 GLIS family zinc finger 2 [ Gallus gallus (chicken) ]

    Gene ID: 374023, updated on 5-Mar-2024

    Summary

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    Symbol
    GLIS2provided by CGNC
    Full Name
    GLIS family zinc finger 2provided by CGNC
    Primary source
    CGNC:49007
    See related
    Ensembl:ENSGALG00010016562
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (12697152..12701952)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (12692542..12697321)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene sarcalumenin Neighboring gene transcription factor AP-4 Neighboring gene presequence translocase associated motor 16 homolog Neighboring gene coronin 7 Neighboring gene vasorin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of NKL, a novel Gli-Kruppel zinc-finger protein that promotes neuronal differentiation. Lamar E, et al. Development, 2001 Apr. PMID 11262234

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein GLIS2
    Names
    Kruppel-like zinc finger protein GLIS2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      12697152..12701952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647716.2 → XP_040503650.1  zinc finger protein GLIS2

      UniProtKB/TrEMBL
      A0A8V0Z3B3
      Related
      ENSGALP00010023090.1, ENSGALT00010039889.1
      Conserved Domains (2) summary
      COG5048
      Location:233 → 325
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:213 → 229
      ZF_C2H2; C2H2 Zn finger [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      12692542..12697321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684189.2 → XP_040540123.1  zinc finger protein GLIS2

      Conserved Domains (2) summary
      COG5048
      Location:233 → 325
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:213 → 229
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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