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FDX1P1 ferredoxin 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 2231, updated on 10-Oct-2023

Summary

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Official Symbol
FDX1P1provided by HGNC
Official Full Name
ferredoxin 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:3640
See related
AllianceGenome:HGNC:3640
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ADXP1; FDXP1
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Genomic context

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Location:
20q11.22
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (34473311..34476492, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (36196483..36199664, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (33061116..33064297, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene itchy E3 ubiquitin protein ligase Neighboring gene MPRA-validated peak4195 silencer Neighboring gene CDC42 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12835 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:33061893-33062837 Neighboring gene microRNA 644a Neighboring gene Sharpr-MPRA regulatory region 10290 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17765 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17766 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:33104047-33104912 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:33110743-33111242 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr20:33113424-33114623 Neighboring gene dynein light chain roadblock-type 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12837 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12839 Neighboring gene microtubule associated protein 1 light chain 3 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and sequence analysis of human placental ferredoxin. Mittal S, et al. Arch Biochem Biophys, 1988 Aug 1. PMID 2969697
  2. Structure, sequence, chromosomal location, and evolution of the human ferredoxin gene family. Chang CY, et al. DNA Cell Biol, 1990 Apr. PMID 2340092

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001117.4 

    Range
    101..3282
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    34473311..34476492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    36196483..36199664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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