Nucleic Acids Res. 1998 Jan 1;26(1):73-9.

SGD: Saccharomyces Genome Database.

Cherry JM, Adler C, Ball C, Chervitz SA, Dwight SS, Hester ET, Jia Y, Juvik G, Roe T, Schroeder M, Weng S, Botstein D.

Source

Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA. cherry@genome.stanford.edu

Abstract

The Saccharomyces Genome Database (SGD) provides Internet access to the complete Saccharomyces cerevisiae genomic sequence, its genes and their products, the phenotypes of its mutants, and the literature supporting these data. The amount of information and the number of features provided by SGD have increased greatly following the release of the S.cerevisiae genomic sequence, which is currently the only complete sequence of a eukaryotic genome. SGD aids researchers by providing not only basic information, but also tools such as sequence similarity searching that lead to detailed information about features of the genome and relationships between genes. SGD presents information using a variety of user-friendly, dynamically created graphical displays illustrating physical, genetic and sequence feature maps. SGD can be accessed via the World Wide Web at http://genome-www.stanford.edu/Saccharomyces/

PMID:: 9399804; [PubMed - indexed for MEDLINE]
PMCID: PMC147204

Free PMC Article

Publication Types, MeSH Terms

Publication Types

Research Support, U.S. Gov't, P.H.S.

MeSH Terms

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Saccharomyces Genome Database

Libraries

LinkOut Holdings

Supplemental Content

Related citations

Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure. [Nucleic Acids Res. 1999]
Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.
Chervitz SA, Hester ET, Ball CA, Dolinski K, Dwight SS, Harris MA, Juvik G, Malekian A, Roberts S, Roe T, et al. Nucleic Acids Res. 1999 Jan 1; 27(1):74-8.
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms. [Nucleic Acids Res. 2004]
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.
Christie KR, Weng S, Balakrishnan R, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Feierbach B, Fisk DG, Hirschman JE, et al. Nucleic Acids Res. 2004 Jan 1; 32(Database issue):D311-4.
Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO). [Nucleic Acids Res. 2002]
Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).
Dwight SS, Harris MA, Dolinski K, Ball CA, Binkley G, Christie KR, Fisk DG, Issel-Tarver L, Schroeder M, Sherlock G, et al. Nucleic Acids Res. 2002 Jan 1; 30(1):69-72.
Review Expanding yeast knowledge online. [Yeast. 1998]
Review Expanding yeast knowledge online.
Dolinski K, Ball CA, Chervitz SA, Dwight SS, Harris MA, Roberts S, Roe T, Cherry JM, Botstein D. Yeast. 1998 Dec; 14(16):1453-69.
Review The hexose transporter family of Saccharomyces cerevisiae. [Arch Microbiol. 1996]
Review The hexose transporter family of Saccharomyces cerevisiae.
Kruckeberg AL. Arch Microbiol. 1996 Nov; 166(5):283-92.

See reviews... See all...

Cited by over 100 PubMed Central articles

HKC: an algorithm to predict protein complexes in protein-protein interaction networks. [J Biomed Biotechnol. 2011]
HKC: an algorithm to predict protein complexes in protein-protein interaction networks.
Wang X, Wang Z, Ye J. J Biomed Biotechnol. 2011; 2011:480294. Epub 2011 Nov 26.
GeneWeaver: a web-based system for integrative functional genomics. [Nucleic Acids Res. 2012]
GeneWeaver: a web-based system for integrative functional genomics.
Baker EJ, Jay JJ, Bubier JA, Langston MA, Chesler EJ. Nucleic Acids Res. 2012 Jan; 40(Database issue):D1067-76. Epub 2011 Nov 12.
Oscillatory dynamics of cell cycle proteins in single yeast cells analyzed by imaging cytometry. [PLoS One. 2011]
Oscillatory dynamics of cell cycle proteins in single yeast cells analyzed by imaging cytometry.
Ball DA, Marchand J, Poulet M, Baumann WT, Chen KC, Tyson JJ, Peccoud J. PLoS One. 2011; 6(10):e26272. Epub 2011 Oct 26.

See all...

Related information

Related Citations
Calculated set of PubMed citations closely related to the selected article(s) retrieved using a word weight algorithm. Related articles are displayed in ranked order from most to least relevant, with the “linked from” citation displayed first.
References for this PMC Article
Citation referenced in PubMed article. Only valid for PubMed citations that are also in PMC.
Free in PMC
Free full text articles in PMC
Cited in PMC
Full-text articles in the PubMed Central Database that cite the current articles.

Recent activity

Clear Turn Off Turn On

SGD: Saccharomyces Genome Database.
SGD: Saccharomyces Genome Database.
Nucleic Acids Res. 1998 Jan 1 ;26(1):73-9.

PubMed
Physiological knockout of the envelope gene of the single-copy ERV-3 human endog...
Physiological knockout of the envelope gene of the single-copy ERV-3 human endogenous retrovirus in a fraction of the Caucasian population.
J Virol. 1998 Apr ;72(4):3442-5.

PubMed
Nucleotide sequence of the fhuC and fhuD genes involved in iron (III) hydroxamat...
Nucleotide sequence of the fhuC and fhuD genes involved in iron (III) hydroxamate transport: domains in FhuC homologous to ATP-binding proteins.
Mol Gen Genet. 1987 Aug ;209(1):49-55.

PubMed
Molecular cloning of a novel C or gamma type chemokine, SCM-1.
Molecular cloning of a novel C or gamma type chemokine, SCM-1.
FEBS Lett. 1995 Feb 27 ;360(2):155-9.

PubMed
Purification and properties of double-stranded RNA-specific adenosine deaminase ...
Purification and properties of double-stranded RNA-specific adenosine deaminase from calf thymus.
Proc Natl Acad Sci U S A. 1994 Oct 25 ;91(22):10596-600.

PubMed

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

PubMed

Display Settings:

Send to: