National Holidays and Social Mobility Behaviors: Alternatives for Forecasting COVID-19 Deaths in Brazil

Int J Environ Res Public Health. 2021 Nov 4;18(21):11595. doi: 10.3390/ijerph182111595.

Abstract

In this paper, we investigate the influence of holidays and community mobility on the transmission rate and death count of COVID-19 in Brazil. We identify national holidays and hallmark holidays to assess their effect on disease reports of confirmed cases and deaths. First, we use a one-variate model with the number of infected people as input data to forecast the number of deaths. This simple model is compared with a more robust deep learning multi-variate model that uses mobility and transmission rates (R0, Re) from a SEIRD model as input data. A principal components model of community mobility, generated by the principal component analysis (PCA) method, is added to improve the input features for the multi-variate model. The deep learning model architecture is an LSTM stacked layer combined with a dense layer to regress daily deaths caused by COVID-19. The multi-variate model incremented with engineered input features can enhance the forecast performance by up to 18.99% compared to the standard one-variate data-driven model.

Keywords: COVID-19; LSTM; PCA; epidemiological SEIRD model; time-series forecast.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brazil / epidemiology
  • COVID-19*
  • Forecasting
  • Holidays
  • Humans
  • SARS-CoV-2
  • Social Mobility