Characterization of a New Bifunctional and Cold-Adapted Polysaccharide Lyase (PL) Family 7 Alginate Lyase from Flavobacterium sp

Mar Drugs. 2020 Jul 26;18(8):388. doi: 10.3390/md18080388.

Abstract

Alginate oligosaccharides produced by enzymatic degradation show versatile physiological functions and biological activities. In this study, a new alginate lyase encoding gene alyS02 from Flavobacterium sp. S02 was recombinantly expressed at a high level in Yarrowia lipolytica, with the highest extracellular activity in the supernatant reaching 36.8 ± 2.1 U/mL. AlyS02 was classified in the polysaccharide lyase (PL) family 7. The optimal reaction temperature and pH of this enzyme were 30 °C and 7.6, respectively, indicating that AlyS02 is a cold-adapted enzyme. Interestingly, AlyS02 contained more than 90% enzyme activity at 25 °C, higher than other cold-adapted enzymes. Moreover, AlyS02 is a bifunctional alginate lyase that degrades both polyG and polyM, producing di- and trisaccharides from alginate. These findings suggest that AlyS02 would be a potent tool for the industrial applications.

Keywords: Flavobacterium sp. S02; Yarrowia lipolytica; alginate lyase; bifunctional; cold-adapted.

MeSH terms

  • Alginates / metabolism*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Enzyme Stability
  • Flavobacterium / enzymology*
  • Flavobacterium / genetics
  • Hydrogen-Ion Concentration
  • Kinetics
  • Phylogeny
  • Polysaccharide-Lyases / genetics
  • Polysaccharide-Lyases / metabolism*
  • Recombinant Proteins / metabolism
  • Seaweed / microbiology
  • Substrate Specificity
  • Temperature

Substances

  • Alginates
  • Bacterial Proteins
  • Recombinant Proteins
  • Polysaccharide-Lyases
  • poly(beta-D-mannuronate) lyase