Isolation of native ASPDs. A, AD brains were stained with rpASD1 (5 μg/ml) or anti-Aβ1–42 C-terminal antibody (0.5 μg/ml; 2 μg/ml for cryosections). B and C, dot blotting of 100-kDa retentates (>100 kDa) of AD or NCI brain extracts (1 μg of soluble extracts/dot) using rpASD1 (Scheffé post hoc test; **, p = 0.0011; *, p = 0.0388). Fr, frontal cortex; Oc, occipital cortex. D and E, TEM images (D) and particle analysis of 100-kDa retentates (n = 3; 10 randomly selected fields) (E). F and G, method for immunoprecipitation (IP) (F) and dot blotting (using rpASD1) of IP supernatants (sup), wash, and eluate fractions. IPs were performed using haASD1, mASD3, or mouse IgG (G). H and I, TEM images (inset, bar, 10 nm) (H) and particle analysis of IP eluates (n = 3; 15 randomly selected fields, background (a small amount of spheres <10 nm contained in eluate with buffers)-subtracted data are shown) (I). J, representative MALDI-TOF/MS data. Aβ-(1–40) and Aβ-(1–42) were detected only in native ASPDs at theoretical monoisotopic mass values (([Aβ-(1–40) + H]+, 4328 Da; [Aβ-(1–42) + H]+, 4512 Da) as observed in synthetic Aβ peptides. K, toxicity of isolated native ASPDs toward primary rat septal neurons (mean ± S.D.; Scheffé post hoc test, **, p < 0.0001, compared with buffer, n > 8) correlated with the 10–15-nm sphere number determined as in I. Neurons treated with NCI-IP eluates showed only background levels of apoptosis similar to those of neurons treated with buffers. Inset, synthetic or native ASPD amounts in Aβ monomer concentrations.