J Chem Inf Model. 2008 Nov;48(11):2118-28.

Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language.

Adams N, Winter J, Murray-Rust P, Rzepa HS.

Source

Unilever Centre for Molecular Science Informatics, University Chemical Laboratory, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom. na303@cam.ac.uk

Abstract

Polymers are among the most important classes of materials but are only inadequately supported by modern informatics. The paper discusses the reasons why polymer informatics is considerably more challenging than small molecule informatics and develops a vision for the computer-aided design of polymers, based on modern semantic web technologies. The paper then discusses the development of Polymer Markup Language (PML). PML is an extensible language, designed to support the (structural) representation of polymers and polymer-related information. PML closely interoperates with Chemical Markup Language (CML) and overcomes a number of the previously identified challenges.

PMID:: 18991372; [PubMed]

LinkOut - more resources

Full Text Sources

Other Literature Sources

COS Scholar Universe

Libraries

LinkOut Holdings

Supplemental Content

Save items

Related citations in PubMed

Chemical markup, XML and the World-Wide Web. 2. Information objects and the CMLDOM. [J Chem Inf Comput Sci. 2001]
Chemical markup, XML and the World-Wide Web. 2. Information objects and the CMLDOM.
Murray-Rust P, Rzepa HS. J Chem Inf Comput Sci. 2001 Sep-Oct; 41(5):1113-23.
Review Potential use of extensible markup language for radiology reporting: a tutorial. [Radiographics. 2000]
Review Potential use of extensible markup language for radiology reporting: a tutorial.
Wang C, Kahn CE Jr. Radiographics. 2000 Jan-Feb; 20(1):287-93.
Chemical Markup, XML, and the World Wide Web. 7. CMLSpect, an XML vocabulary for spectral data. [J Chem Inf Model. 2007]
Chemical Markup, XML, and the World Wide Web. 7. CMLSpect, an XML vocabulary for spectral data.
Kuhn S, Helmus T, Lancashire RJ, Murray-Rust P, Rzepa HS, Steinbeck C, Willighagen EL. J Chem Inf Model. 2007 Nov-Dec; 47(6):2015-34. Epub 2007 Sep 22.
Chemical markup, XML, and the World Wide Web. 5. Applications of chemical metadata in RSS aggregators. [J Chem Inf Comput Sci. 2004]
Chemical markup, XML, and the World Wide Web. 5. Applications of chemical metadata in RSS aggregators.
Murray-Rust P, Rzepa HS, Williamson MJ, Willighagen EL. J Chem Inf Comput Sci. 2004 Mar-Apr; 44(2):462-9.
Review Defining extensible markup language standards for electromyography data transmission across the world-wide web. [Muscle Nerve. 2002]
Review Defining extensible markup language standards for electromyography data transmission across the world-wide web.
Jabre JF, Salzsieder BT. Muscle Nerve. 2002; Suppl 11:S72-6.

See reviews... See all...

Cited by 4 PubMed Central articles

CML: Evolution and design. [J Cheminform. 2011]
CML: Evolution and design.
Murray-Rust P, Rzepa HS. J Cheminform. 2011 Oct 14; 3(1):44. Epub 2011 Oct 14.
The semantics of Chemical Markup Language (CML): dictionaries and conventions. [J Cheminform. 2011]
The semantics of Chemical Markup Language (CML): dictionaries and conventions.
Murray-Rust P, Townsend JA, Adams SE, Phadungsukanan W, Thomas J. J Cheminform. 2011 Oct 14; 3:43. Epub 2011 Oct 14.
Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration. [J Cheminform. 2011]
Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration.
Chepelev LL, Dumontier M. J Cheminform. 2011 May 19; 3(1):20. Epub 2011 May 19.

See all...

Related information

Related Citations
Calculated set of PubMed citations closely related to the selected article(s) retrieved using a word weight algorithm. Related articles are displayed in ranked order from most to least relevant, with the “linked from” citation displayed first.
Cited in PMC
Full-text articles in the PubMed Central Database that cite the current articles.

Recent activity

Clear Turn Off Turn On

Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language.
Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language.
J Chem Inf Model. 2008 Nov ;48(11):2118-28.

PubMed
Delayed access to health care: risk factors, reasons, and consequences.
Delayed access to health care: risk factors, reasons, and consequences.
Ann Intern Med. 1991 Feb 15 ;114(4):325-31.

PubMed
Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sin...
Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).
Plant Cell Rep. 2009 Feb ;28(2):281-9. Epub 2008 Nov 7 .

PubMed
Enhanced host cell reactivation of damaged plasmid DNA in HeLa cells resistant t...
Enhanced host cell reactivation of damaged plasmid DNA in HeLa cells resistant to cis-diamminedichloroplatinum(II).
Cancer Res. 1991 Jan 15 ;51(2):601-5.

PubMed
Pregnancy outcome in women infected with HIV-1 receiving combination antiretrovi...
Pregnancy outcome in women infected with HIV-1 receiving combination antiretroviral therapy before versus after conception.
Sex Transm Infect. 2009 Apr ;85(2):82-7. Epub 2008 Nov 5 .

PubMed

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

PubMed

Result Filters

Display Settings:

Send to:

Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language.

Source

Abstract

LinkOut - more resources

Full Text Sources

Other Literature Sources

Libraries

Supplemental Content

Save items

Related citations in PubMed

Cited by 4 PubMed Central articles

Related information

Recent activity

Simple NCBI Directory

Getting Started

Resources

Popular

Featured

NCBI Information