Genome Biol. 2007;8(1):R3.

GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists.

Carmona-Saez P, Chagoyen M, Tirado F, Carazo JM, Pascual-Montano A.

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BioComputing Unit, National Center of Biotechnology (CNB-CSIC), C/Darwin 3, Campus Universidad Autónoma de Madrid, 28049 Madrid, Spain. pcarmona@cnb.uam.es

Abstract

We present GENECODIS, a web-based tool that integrates different sources of information to search for annotations that frequently co-occur in a set of genes and rank them by statistical significance. The analysis of concurrent annotations provides significant information for the biologic interpretation of high-throughput experiments and may outperform the results of standard methods for the functional analysis of gene lists. GENECODIS is publicly available at http://genecodis.dacya.ucm.es/.

PMID:: 17204154; [PubMed - indexed for MEDLINE]
PMCID: PMC1839127

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