The structure of human uPAR. (A)The overall modular structure of uPAR as a ribbon diagram. The individual uPAR domains are assembled in a right-handed orientation and are coloured yellow (DI), blue (DII) and red (DIII). The inset illustrates the typical β-strand nomenclature (Low et al, 1976) for a three-fingered fold, using bucandin as a model (Torres et al, 2001). Adopting this nomenclature, the 17 β-strands of uPAR encompass the regions 2–6 (βIA), 12–16 (βIB), 23–33 (βIC), 36–46 (βID), 53–57 (βIE) and 64–71 (βIF) in DI; 94–96 (βIIA), 112–114 (βIIB), 121–129 (βIIC), 142–149 (βIID), 155–160 (βIIE) and 164–171 (βIIF) in DII; and 189–199 (βIIIA), 211- 216 (βIIIB), 221–229 (βIIIC), 234–242 (βIIID) and 262–266 (βIIIF) in DIII. The short helical stretches in DIII (αIIIE) encompass residues 244–248 and 250–255. The bended β-strands in DII and DIII are indicated separately. (B) From left to right, superimpositions of bucandin (yellow) on uPAR DI and DII (grey) and of CD59 (orange) on uPAR DIII (grey). Disulphide bonds are coloured green in the superimpositions. For sake of clarity, the positions of the N- and C-termini are indicated in panel A.