Bioinformatics. 2003 Sep 1;19(13):1720-2.

ESTAP--an automated system for the analysis of EST data.

Source

Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA. chmao@vt.edu

Abstract

The EST Analysis Pipeline (ESTAP) is a set of analytical procedures that automatically verify, cleanse, store and analyze ESTs generated on high-throughput platforms. It uses a relational database to store sequence data and analysis results, which facilitates both the search for specific information and statistical analysis. ESTAP provides for easy viewing of the original and cleansed data, as well as the analysis results via a Web browser. It also allows the data owner to submit selected sequences to dbEST in a semi-automated fashion.

PMID:: 15593407; [PubMed - indexed for MEDLINE]

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Cited by 23 PubMed Central articles

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Sequencing, analysis, and annotation of expressed sequence tags for Camelus dromedarius. [PLoS One. 2010]
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