(A) Alignment of the sequence of Hpt from L. monocytogenes P14 (EMBL database accession no. AJ315765) with that of the UhpT-related transporters from S. enterica serovar Typhimurium (SwissProt database accession no. P27670), S. flexneri (S. flexneri 2a genome sequence in progress, University of Wisconsin-Madison, http://www.genome.wisc.edu/html/sflex.html), C. trachomatis (SwissProt database accession no. O84548), and human G6PT (SwissProt database accession no. O43826). (B) Phylogenetic tree of bacterial and mammalian HP transporters. The dendrogram was generated with the neighbor-joining algorythm by using the clustalx package (20). The bifurcations are supported by the indicated bootstrap values. The segment above the tree indicates the genetic distance. SwissProt database accession nos.: C. pneumoniae, Q9Z7N9; E. coli, P13408; Rattus norvegicus, Q9Z296; and Mus musculus, Q9D1F9. In parentheses after each species name, the percentage identity/similarity with respect to the L. monocytogenes Hpt (C). Promoter regions of PrfA-dependent virulence genes of L. monocytogenes. PrfA binding sites, centered on position −41.5 relative to the transcription start site, are boxed and −10 motifs are underlined. Promoters with a perfectly symmetric PrfA box (i.e., hly and plcA) are very sensitive to PrfA whereas those with mismatches in their PrfA box require larger amounts of the regulatory protein to become fully activated. The hpt gene has a PrfA box with one terminal mismatch, similar to actA, the promoter of which has a high threshold for PrfA-mediated activation and is therefore inactive extracellularly but fully induced in the host cell cytosol (see text). Regulation by PrfA is less stringent in promoters with PrfA boxes with more than one mismatch (e.g., inlA) (4, 5).