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1: NAE1 NEDD8 activating enzyme E1 subunit 1 [ Homo sapiens ]

GeneID: 8883 updated 05-Jul-2009

[Top][Help]Summary

Official Symbol
NAE1provided by HGNC
Official Full Name
NEDD8 activating enzyme E1 subunit 1provided by HGNC
Primary source
HGNC:621
See related
Ensembl:ENSG00000159593; HPRD:04545; MIM:603385
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HPP1; ula-1; APPBP1; A-116A10.1; NAE1
Summary
The protein encoded by this gene binds to the beta-amyloid precursor protein. Beta-amyloid precursor protein is a cell surface protein with signal-transducing properties, and it is thought to play a role in the pathogenesis of Alzheimer's disease. In addition, the encoded protein can form a heterodimer with UBE1C and bind and activate NEDD8, a ubiquitin-like protein. This protein is required for cell cycle progression through the S/M checkpoint. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer




Genomic context[Top][Help]

chromosome: 16; Location: 16q22See NAE1 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into FunctionWhat's a GeneRIF?

PubMed 1. APP-BP1 is degraded by ubiquitin-dependent proteolysis.
PubMed 2. Conservation in the mechanism of Nedd8 activation by the human AppBp1-Uba3 heterodimer.
PubMed 3. structure and mutational analysis of human APPBP1-UBA3, the heterodimeric E1 enzyme for NEDD8
PubMed 4. Data report the structure of the quaternary complex between human APPBP1-UBA3, a heterodimeric E1, its ubl NEDD8, and ATP.

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  NP_003896.1   NP_000475.1   APP     HPRD   PubMed
The carboxy terminus of Amyloid Precursor Protein (APP) mediates an interaction with APP-BP1.
  NP_003896.1   NP_000475.1   APP     BIND   PubMed
ASPP2 inhibits APP-BP1-mediated NEDD8 conjugation to cullin-1 and decreases APP-BP1-induced cell proliferation and neuronal apoptosis
  NP_003896.1   NP_005417.1   TP53BP2     BIND   PubMed
APP-BP1 interaction with hUba3 is necessary to drive cell cycle through S-M checkpoint
  NP_003896.1   AAC27648.1   UBA3     BIND   PubMed
 
  NP_003896.1   NP_003959.2   UBA3     HPRD   PubMed
APPBP1 interacts with the Zn2+-bound form of UBA3 to form a heterodimeric enzyme complex.
  NP_003896.1         BIND   PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:114402   BioGRID:106848   APP     BioGRID   PubMed
Affinity Capture-Western; Biochemical Activity
  BioGRID:114402   BioGRID:114731   TRIP12     BioGRID   PubMed
Affinity Capture-Western; Two-hybrid
  BioGRID:114402   BioGRID:114503   UBA3     BioGRID   PubMed
Affinity Capture-MS
  BioGRID:114402   BioGRID:114504   UBE2M     BioGRID   PubMed
Two-hybrid
  BioGRID:114402   BioGRID:121223   UBQLN4     BioGRID   PubMed

[Top][Help]General gene information

Markers

RH65010(e-PCR)
Links: UniSTS:85575
Alternate name: stSG10065
Cda01h11(e-PCR)
Links: UniSTS:76629
Alternate names: D16S2563E; GDB:447114; RH10843; RH85101; RH85173; SHGC-61013; SHGC-61206

Pathways

KEGG pathway: Alzheimer's disease
05010

Homology

Mouse, Rat
Map Viewer

GeneOntology Provided by GOA

Function Evidence
contributes_to NEDD8 activating enzyme activity
PubMed 12740388
IPI PubMed
catalytic activity IEA
protein binding
PubMed 8626687,10722740,12694406,14557245,15361859
IPI PubMed
protein heterodimerization activity
PubMed 12740388
IPI PubMed
Process Evidence
DNA replication
PubMed 14557245
IDA PubMed
S-M checkpoint
PubMed 10722740
IDA PubMed
cell cycle IEA
metabolic process IEA
modification-dependent protein catabolic process IEA
protein neddylation
PubMed 10207026,12740388
IDA PubMed
regulation of apoptosis
PubMed 10722740,14557245
IDA PubMed
signal transduction
PubMed 8626687
TAS PubMed
Component Evidence
cytoplasm
PubMed 8626687
TAS PubMed
insoluble fraction
PubMed 14557245
IDA PubMed
plasma membrane IEA

[Top][Help]General protein information

Preferred Names
NEDD8 activating enzyme E1 subunit 1
Names
NEDD8 activating enzyme E1 subunit 1
protooncogene protein 1
amyloid protein-binding protein 1
NEDD8-activating enzyme E1 subunit
amyloid beta precursor protein-binding protein 1, 59kD
amyloid beta precursor protein binding protein 1, 59kDa

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_001018159.1NP_001018169.1 NEDD8 activating enzyme E1 subunit 1 isoform b

    Description
    Transcript Variant: This variant (2) contains an alternate exon compared to variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
    Source sequence(s)
    BC000480,BM045535,BM785899
    Consensus CDS
    CCDS42171.1
    UniProtKB/TrEMBL
    A6NFN4
    UniProtKB/Swiss-Prot
    Q13564
    Conserved Domains (2) summary
    cd01493
    Location:12393
    Blast Score:1552
    APPBP1_RUB; Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to...
    cl00287
    Location:443526
    Blast Score:213
    E1_enzyme_family; Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common...
  2. NM_001018160.1NP_001018170.1 NEDD8 activating enzyme E1 subunit 1 isoform c

    Description
    Transcript Variant: This variant (3) lacks an alternate exon compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a.
    Source sequence(s)
    BC000480,BM785899
    Consensus CDS
    CCDS42172.1
    UniProtKB/TrEMBL
    A8MU28
    UniProtKB/Swiss-Prot
    Q13564
    Conserved Domains (2) summary
    cd01493
    Location:1310
    Blast Score:1201
    APPBP1_RUB; Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to...
    cl00287
    Location:360443
    Blast Score:212
    E1_enzyme_family; Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common...
  3. NM_003905.3NP_003896.1 NEDD8 activating enzyme E1 subunit 1 isoform a

    Description
    Transcript Variant: This variant (1) encodes the longest and predominant isoform (a).
    Source sequence(s)
    BC000480,BM785899
    Consensus CDS
    CCDS10820.1
    UniProtKB/TrEMBL
    B2R700
    UniProtKB/Swiss-Prot
    Q13564
    Conserved Domains (2) summary
    cd01493
    Location:11399
    Blast Score:1597
    APPBP1_RUB; Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to...
    cl00287
    Location:449532
    Blast Score:213
    E1_enzyme_family; Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common...

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000016.9 Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

    Range
    66864879..66836781, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)
  2. NT_010498.15

    Range
    20479078..20450980, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000059.1 Alternate assembly (Celera)

    Range
    51373189..51345091, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)
  2. NW_926462.1

    Range
    20437988..20409890, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000148.1 Alternate assembly (HuRef)

    Range
    52739089..52710930, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)
  2. NW_001838290.1

    Range
    11025994..10997835, complement
    Download
    GenBank  FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

Nucleotide   Protein
Genomic   AC004638.1   AAC23784.1
Genomic   AC044802.6 (72220..100318, complement)    None
Genomic   CH471092.1   EAW83042.1
    EAW83043.1
mRNA   AK097680.1   BAG53511.1
mRNA   AK298159.1   BAH12735.1
mRNA   AK307677.1    None
mRNA   AK312784.1   BAG35647.1
mRNA   AL136798.1   CAB66732.1
mRNA   AY197612.1   AAP35030.1
mRNA   BC000480.2   AAH00480.1
mRNA   BC013301.2   AAH13301.1
mRNA   BC041323.2    None
mRNA   BM045535.1    None
mRNA   BM785899.1    None
mRNA   CR597312.1    None
mRNA   CR611333.1    None
mRNA   CR614006.1    None
mRNA   U50939.1   AAC50477.1
Synthetic   DQ892741.2   ABM83667.1
Synthetic   DQ895987.2   ABM86913.1
Protein Accession   Links
Q13564.1   GenPept   UniProtKB/Swiss-Prot