1: SMO smoothened homolog (Drosophila) [ Homo sapiens ]
GeneID: 6608 updated 05-Jul-2009 - Official Symbol
- SMOprovided by HGNC
- Official Full Name
- smoothened homolog (Drosophila)provided by HGNC
- Primary source
- HGNC:11119
- See related
- Ensembl:ENSG00000128602; HPRD:03294; MIM:601500
- Gene type
- protein coding
- RefSeq status
- PROVISIONAL
- Organism
- Homo sapiens
- Lineage
- Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
- Also known as
- Gx; SMOH; SMO
[Top][Help]Genomic regions, transcripts, and products
chromosome: 7; Location: 7q32.3See SMO in MapViewer
Related Articles in PubMed
GeneRIFs: Gene References Into FunctionWhat's a GeneRIF?
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1. |
The interactions of small molecule agonists and antagonists with SMO were characterized. |
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2. |
Observational study of gene-disease association. (HuGE Navigator) |
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3. |
Observational study of gene-disease association and gene-environment interaction. (HuGE Navigator) |
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4. |
Observational study of gene-disease association, gene-gene interaction, and gene-environment interaction. (HuGE Navigator) |
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5. |
Constitutive activation of the hedgehog signaling pathway in chondrosarcoma is rarely caused by SMO protein mutation. |
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6. |
mutations are rare in SMO in sporadic and nevoid basal cell carcinoma syndrome-associated keratocystic odontogenic tumors |
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7. |
Smo mutants augment p53 binding to the E3 ubiquitin-protein ligase Mdm2 and promote p53 ubiquitination. |
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8. |
Significantly high levels of ultraviolet-specific mutations in the smoothened gene are found in basal cell carcinomas from DNA repair-deficient xeroderma pigmentosum patients. |
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9. |
beta-Arrestin 2 and GRK2 are potential mediators of signaling by activated Smoothened |
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10. |
the upstream part of the Hedgehog pathway involving Hedgehog interaction with Patched, regulation of Smoothened by Patched, and Smoothened enrichment at the plasma membrane is highly conserved between Drosophila and humans |
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11. |
results suggest that the Ptc tumour suppressor functions normally as a transmembrane molecular transporter, which acts indirectly to inhibit Smo activity |
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12. |
aberrant expressions of PTCH and Smo were common in pancreatic carcinoma tissues & were associated with low-level differentiation of tumor tissue & hyperglycemia; this indicated that these molecules played a fundamental role in pancreas tumorigenesis |
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13. |
overexpression and/or tumorigenic activation of the Smo proto-oncogene mediates c-myc overexpression which plays a critical role in hepatocarcinogenesis; study suggests that Smo is a prognostic factor in HCC tumorigenesis |
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14. |
smoothened expression in human astrocytic tumors inversely correlates with histological malignancy |
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15. |
role of the human M2SMO mutant in BCC development in adult transgenic mice |
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16. |
analysis of Hedgehog modulator properties after functional coupling of Smoothened to G15 |
[Top][Help]General gene informationMarkers
Phenotypes
Pathways
- KEGG pathway: Basal cell carcinoma
- 05217
- KEGG pathway: Hedgehog signaling pathway
- 04340
Homology
GeneOntology Provided by GOA
[Top][Help]General protein information- Preferred Names
- smoothened
- Names
- smoothened
- seven transmembrane helix receptor
[Top][Help]NCBI Reference Sequences (RefSeq)RefSeqs maintained independently of Annotated Genomes
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
NM_005631.3→NP_005622.1 smoothened
- Source sequence(s)
- BC009989
- Consensus CDS
- CCDS5811.1
- UniProtKB/TrEMBL
- A4D1K5
- UniProtKB/Swiss-Prot
- Q99835
- Conserved Domains (3) summary
- pfam01534
Location:220–554 Blast Score:1152
- Frizzled; Frizzled/Smoothened family membrane region
- cl09373
Location:272–433 Blast Score:97
- 7tm_2; 7 transmembrane receptor (Secretin family)
- cl02447
Location:70–181 Blast Score:322
- Fz; Fz domain
RefSeqs of Annotated Genomes: Build 37.1
The following sections contain reference sequences that belong to a specific genome build. Explain This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.
Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly
Genomic
NC_000007.13 Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly
- Range
- 128828713..128853386
- Download
- GenBank FASTA Sequence Viewer (Graphics)
NT_007933.15
- Range
- 66861556..66886229
- Download
- GenBank FASTA Sequence Viewer (Graphics)
Alternate assembly (CRA_TCAGchr7v2)
Genomic
AC_000068.1 Alternate assembly (CRA_TCAGchr7v2)
- Range
- 128212668..128237345
- Download
- GenBank FASTA Sequence Viewer (Graphics)
NT_079596.2
- Range
- 28248236..28272913
- Download
- GenBank FASTA Sequence Viewer (Graphics)
Alternate assembly (Celera)
Genomic
AC_000050.1 Alternate assembly (Celera)
- Range
- 123625432..123650109
- Download
- GenBank FASTA Sequence Viewer (Graphics)
NW_923640.1
- Range
- 26384183..26408860
- Download
- GenBank FASTA Sequence Viewer (Graphics)
Alternate assembly (HuRef)
Genomic
AC_000139.1 Alternate assembly (HuRef)
- Range
- 123214627..123189939, complement
- Download
- GenBank FASTA Sequence Viewer (Graphics)
NW_001839071.2
- Range
- 2464576..2439888, complement
- Download
- GenBank FASTA Sequence Viewer (Graphics)
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