Conserved Protein Domain Family
COG1724

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COG1724: COG1724 (this model, PSSM-Id:31910 is obsolete and has been replaced by 441330)
Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only]
Statistics
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PSSM-Id: 31910
Aligned: 13 rows
Threshold Bit Score: -1
Created: 7-Oct-2002
Updated: 9-May-2007
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16122070  57 KSQGVRVKSSELIKLLETNGWKLMRVKGSHHQFKHPDfAAVITVP-HPKKDVKPGTLRQILKDANLS 122 Yersinia pestis
16127414   1 ------MNSREVIAALEADGWVEVARRGSHAQFKHPTkSGRVTVP-HPKRDLPLGTLRSIERQADLK 60  Caulobacter crescentus CB15
20089650   1 MSRLLPVSGRDMCKILEMLGFQKVHQVGSHVRYVHPD-GRKTVVPvHGNEDLGTGLIKEILKQTRIS 66  Methanosarcina acetivorans C2A
20090978   1 ------MKVREVIKHLEADGWYLVATKGSHRQYKHPAkPGRVTIAgHSGDDLAPGTLNSILKQAQLK 61  Methanosarcina acetivorans C2A
20092919   1 MSKILPLPAKKVVKALENIGFEQIRQKGSHLFLRHPD-GRTTIVPmHPTEKIGSGMINKIIKDAKIT 66  Methanosarcina acetivorans C2A
15965792   1 ------MKSGDIIAALQKDGWYEVATKGSHVQFKHPKkHGRVTVP-HPKRDLPIGTLRSIEKQSGLK 60  Sinorhizobium meliloti
15644067   1 MSYLPIVDPKTMEKVLLKLGFQRVRQKGSHVFYRHSN-GKYTTIPfHAKETCPSHLIRKIIREAGIS 66  Thermotoga maritima
17229316   1 MPKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDD-GRLVTVPvHAGKTIGRGWLSKILRDAELT 66  Nostoc sp. PCC 7120
17230206   1 ------MKVSEVIKRLETDGWYLARTKGSHRQFKHPDkTGTVTVSgKPSVDVPIGTLKNIWRQAQLE 61  Nostoc sp. PCC 7120
15612026   1 ---MPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDK--IRQVLPfHSGEILHPKIVKEIMENTLK- 61  Helicobacter pylori J99
13471995   1 ------MNSAEIIRQLQADGWFEVARKGSHAQFKHRDkQGRVTVP-HPKRDIPIGTLRSIEKQSGLK 60  Mesorhizobium loti
16330479   1 ------MKVKVILKILERDGWYVARIRGSHRQLKHPHkAGLVTVLgKPSDELAPGTLASILKQSSQA 61  Synechocystis sp. PCC 6803
16329523   1 MSNLPSVQAKDFIRVIKKLGFFLERQKGSHAIYKNTQ-GNRVVVPiHPGKDLKQGTLMGMIKDIGLE 66  Synechocystis sp. PCC 6803
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