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Results: 1 to 20 of 40

1.

Use of Two-Part Regression Calibration Model to Correct for Measurement Error in Episodically Consumed Foods in a Single-Replicate Study Design: EPIC Case Study.

Agogo GO, der Voet Hv, Veer PV, Ferrari P, Leenders M, Muller DC, Sánchez-Cantalejo E, Bamia C, Braaten T, Knüppel S, Johansson I, van Eeuwijk FA, Boshuizen H.

PLoS One. 2014 Nov 17;9(11):e113160. doi: 10.1371/journal.pone.0113160. eCollection 2014.

PMID:
25402487
[PubMed - in process]
Free PMC Article
2.

A general modeling framework for genome ancestral origins in multiparental populations.

Zheng C, P Boer M, van Eeuwijk FA.

Genetics. 2014 Sep;198(1):87-101. doi: 10.1534/genetics.114.163006.

PMID:
25236451
[PubMed - in process]
3.

A new method to infer causal phenotype networks using QTL and phenotypic information.

Wang H, van Eeuwijk FA.

PLoS One. 2014 Aug 21;9(8):e103997. doi: 10.1371/journal.pone.0103997. eCollection 2014.

PMID:
25144184
[PubMed - in process]
Free PMC Article
4.

Variation in broccoli cultivar phytochemical content under organic and conventional management systems: implications in breeding for nutrition.

Renaud EN, Lammerts van Bueren ET, Myers JR, Paulo MJ, van Eeuwijk FA, Zhu N, Juvik JA.

PLoS One. 2014 Jul 16;9(7):e95683. doi: 10.1371/journal.pone.0095683. eCollection 2014.

PMID:
25028959
[PubMed - in process]
Free PMC Article
5.

Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle.

van Binsbergen R, Bink MC, Calus MP, van Eeuwijk FA, Hayes BJ, Hulsegge I, Veerkamp RF.

Genet Sel Evol. 2014 Jul 15;46:41. doi: 10.1186/1297-9686-46-41.

PMID:
25022768
[PubMed - in process]
Free PMC Article
6.

Identification of agronomically important QTL in tetraploid potato cultivars using a marker-trait association analysis.

D'hoop BB, Keizer PL, Paulo MJ, Visser RG, van Eeuwijk FA, van Eck HJ.

Theor Appl Genet. 2014 Mar;127(3):731-48. doi: 10.1007/s00122-013-2254-y. Epub 2014 Jan 10.

PMID:
24408376
[PubMed - indexed for MEDLINE]
7.

Multi-trait and multi-environment QTL analyses of yield and a set of physiological traits in pepper.

Alimi NA, Bink MC, Dieleman JA, Magán JJ, Wubs AM, Palloix A, van Eeuwijk FA.

Theor Appl Genet. 2013 Oct;126(10):2597-625. doi: 10.1007/s00122-013-2160-3. Epub 2013 Aug 1.

PMID:
23903631
[PubMed - indexed for MEDLINE]
8.

The statistical analysis of multi-environment data: modeling genotype-by-environment interaction and its genetic basis.

Malosetti M, Ribaut JM, van Eeuwijk FA.

Front Physiol. 2013 Mar 12;4:44. doi: 10.3389/fphys.2013.00044. eCollection 2013.

PMID:
23487515
[PubMed]
Free PMC Article
9.

Maximizing genetic differentiation in core collections by PCA-based clustering of molecular marker data.

van Heerwaarden J, Odong TL, van Eeuwijk FA.

Theor Appl Genet. 2013 Mar;126(3):763-72. doi: 10.1007/s00122-012-2016-2. Epub 2012 Nov 21.

PMID:
23178877
[PubMed - indexed for MEDLINE]
10.

Quality of core collections for effective utilisation of genetic resources review, discussion and interpretation.

Odong TL, Jansen J, van Eeuwijk FA, van Hintum TJ.

Theor Appl Genet. 2013 Feb;126(2):289-305. doi: 10.1007/s00122-012-1971-y. Epub 2012 Sep 15. Review.

PMID:
22983567
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Studying the genetic basis of drought tolerance in sorghum by managed stress trials and adjustments for phenological and plant height differences.

Sabadin PK, Malosetti M, Boer MP, Tardin FD, Santos FG, Guimarães CT, Gomide RL, Andrade CL, Albuquerque PE, Caniato FF, Mollinari M, Margarido GR, Oliveira BF, Schaffert RE, Garcia AA, van Eeuwijk FA, Magalhaes JV.

Theor Appl Genet. 2012 May;124(8):1389-402. doi: 10.1007/s00122-012-1795-9.

PMID:
22297563
[PubMed - indexed for MEDLINE]
12.

Genome-wide association studies for agronomical traits in a world wide spring barley collection.

Pasam RK, Sharma R, Malosetti M, van Eeuwijk FA, Haseneyer G, Kilian B, Graner A.

BMC Plant Biol. 2012 Jan 27;12:16. doi: 10.1186/1471-2229-12-16.

PMID:
22284310
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A mixed model QTL analysis for sugarcane multiple-harvest-location trial data.

Pastina MM, Malosetti M, Gazaffi R, Mollinari M, Margarido GR, Oliveira KM, Pinto LR, Souza AP, van Eeuwijk FA, Garcia AA.

Theor Appl Genet. 2012 Mar;124(5):835-49. doi: 10.1007/s00122-011-1748-8. Epub 2011 Dec 13.

PMID:
22159754
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

On the increase of predictive performance with high-level data fusion.

Doeswijk TG, Smilde AK, Hageman JA, Westerhuis JA, van Eeuwijk FA.

Anal Chim Acta. 2011 Oct 31;705(1-2):41-7. doi: 10.1016/j.aca.2011.03.025. Epub 2011 Mar 17.

PMID:
21962346
[PubMed - indexed for MEDLINE]
15.

Determination of genetic structure of germplasm collections: are traditional hierarchical clustering methods appropriate for molecular marker data?

Odong TL, van Heerwaarden J, Jansen J, van Hintum TJ, van Eeuwijk FA.

Theor Appl Genet. 2011 Jul;123(2):195-205. doi: 10.1007/s00122-011-1576-x. Epub 2011 Apr 7.

PMID:
21472410
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Gene and QTL detection in a three-way barley cross under selection by a mixed model with kinship information using SNPs.

Malosetti M, van Eeuwijk FA, Boer MP, Casas AM, Elía M, Moralejo M, Bhat PR, Ramsay L, Molina-Cano JL.

Theor Appl Genet. 2011 May;122(8):1605-16. doi: 10.1007/s00122-011-1558-z. Epub 2011 Mar 4.

PMID:
21373796
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Analysis of natural allelic variation in Arabidopsis using a multiparent recombinant inbred line population.

Huang X, Paulo MJ, Boer M, Effgen S, Keizer P, Koornneef M, van Eeuwijk FA.

Proc Natl Acad Sci U S A. 2011 Mar 15;108(11):4488-93. doi: 10.1073/pnas.1100465108. Epub 2011 Feb 23.

PMID:
21368205
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments.

Comadran J, Russell JR, Booth A, Pswarayi A, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A, Ouabbou H, Bort J, van Eeuwijk FA, Thomas WT, Romagosa I.

Theor Appl Genet. 2011 May;122(7):1363-73. doi: 10.1007/s00122-011-1537-4. Epub 2011 Jan 30.

PMID:
21279625
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Gene regulatory networks from multifactorial perturbations using Graphical Lasso: application to the DREAM4 challenge.

Menéndez P, Kourmpetis YA, ter Braak CJ, van Eeuwijk FA.

PLoS One. 2010 Dec 20;5(12):e14147. doi: 10.1371/journal.pone.0014147.

PMID:
21188141
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Population structure and linkage disequilibrium unravelled in tetraploid potato.

D'hoop BB, Paulo MJ, Kowitwanich K, Sengers M, Visser RG, van Eck HJ, van Eeuwijk FA.

Theor Appl Genet. 2010 Oct;121(6):1151-70. doi: 10.1007/s00122-010-1379-5. Epub 2010 Jun 20.

PMID:
20563789
[PubMed - indexed for MEDLINE]
Free PMC Article
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