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    Results: 1 to 20 of 32

    1.

    Exceptional error minimization in putative primordial genetic codes.

    Novozhilov AS, Koonin EV.

    Biol Direct. 2009 Nov 19;4(1):44. [Epub ahead of print]PMID: 19925661 [PubMed - as supplied by publisher]Related articles

    2.

    Is evolution Darwinian or/and Lamarckian?

    Koonin EV, Wolf YI.

    Biol Direct. 2009 Nov 11;4(1):42. [Epub ahead of print]PMID: 19906303 [PubMed - as supplied by publisher]Related articlesFree article

    3.

    Identification of an ortholog of the eukaryotic RNA polymerase III subunit RPC34 in Crenarchaeota and Thaumarchaeota suggests specialization of RNA polymerases for coding and non-coding RNAs in Archaea.

    Blombach F, Makarova KS, Marrero J, Siebers B, Koonin EV, van der Oost J.

    Biol Direct. 2009 Oct 14;4:39.PMID: 19828044 [PubMed - in process]Related articlesFree article

    4.

    The fundamental units, processes and patterns of evolution, and the tree of life conundrum.

    Koonin EV, Wolf YI.

    Biol Direct. 2009 Sep 29;4:33.PMID: 19788730 [PubMed - in process]Related articlesFree article

    5.

    Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements.

    Makarova KS, Wolf YI, van der Oost J, Koonin EV.

    Biol Direct. 2009 Aug 25;4:29.PMID: 19706170 [PubMed - in process]Related articlesFree article

    6.

    Comprehensive comparative-genomic analysis of type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes.

    Makarova KS, Wolf YI, Koonin EV.

    Biol Direct. 2009 Jun 3;4:19.PMID: 19493340 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Evolution of DNA polymerases: an inactivated polymerase-exonuclease module in Pol epsilon and a chimeric origin of eukaryotic polymerases from two classes of archaeal ancestors.

    Tahirov TH, Makarova KS, Rogozin IB, Pavlov YI, Koonin EV.

    Biol Direct. 2009 Mar 18;4:11.PMID: 19296856 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    The origins of phagocytosis and eukaryogenesis.

    Yutin N, Wolf MY, Wolf YI, Koonin EV.

    Biol Direct. 2009 Feb 26;4:9.PMID: 19245710 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution.

    Wolf MY, Wolf YI, Koonin EV.

    Biol Direct. 2008 Oct 7;3:40.PMID: 18840284 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    A highly conserved family of inactivated archaeal B family DNA polymerases.

    Rogozin IB, Makarova KS, Pavlov YI, Koonin EV.

    Biol Direct. 2008 Aug 6;3:32.PMID: 18684330 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Accumulation of GC donor splice signals in mammals.

    Churbanov A, Winters-Hilt S, Koonin EV, Rogozin IB.

    Biol Direct. 2008 Jul 9;3:30.PMID: 18613975 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.

    Hou S, Makarova KS, Saw JH, Senin P, Ly BV, Zhou Z, Ren Y, Wang J, Galperin MY, Omelchenko MV, Wolf YI, Yutin N, Koonin EV, Stott MB, Mountain BW, Crowe MA, Smirnova AV, Dunfield PF, Feng L, Wang L, Alam M.

    Biol Direct. 2008 Jul 1;3:26.PMID: 18593465 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    U12 intron positions are more strongly conserved between animals and plants than U2 intron positions.

    Basu MK, Makalowski W, Rogozin IB, Koonin EV.

    Biol Direct. 2008 May 14;3:19.PMID: 18479526 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Evolutionary primacy of sodium bioenergetics.

    Mulkidjanian AY, Galperin MY, Makarova KS, Wolf YI, Koonin EV.

    Biol Direct. 2008 Apr 1;3:13.PMID: 18380897 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Homoplasy in genome-wide analysis of rare amino acid replacements: the molecular-evolutionary basis for Vavilov's law of homologous series.

    Rogozin IB, Thomson K, Csürös M, Carmel L, Koonin EV.

    Biol Direct. 2008 Mar 17;3:7.PMID: 18346278 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    The prokaryotic V4R domain is the likely ancestor of a key component of the eukaryotic vesicle transport system.

    Podar M, Wall MA, Makarova KS, Koonin EV.

    Biol Direct. 2008 Jan 25;3:2. Review.PMID: 18221539 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Orthologs of the small RPB8 subunit of the eukaryotic RNA polymerases are conserved in hyperthermophilic Crenarchaeota and "Korarchaeota".

    Koonin EV, Makarova KS, Elkins JG.

    Biol Direct. 2007 Dec 14;2:38.PMID: 18081935 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea.

    Makarova KS, Sorokin AV, Novichkov PS, Wolf YI, Koonin EV.

    Biol Direct. 2007 Nov 27;2:33.PMID: 18042280 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Evolution of the genetic code: partial optimization of a random code for robustness to translation error in a rugged fitness landscape.

    Novozhilov AS, Wolf YI, Koonin EV.

    Biol Direct. 2007 Oct 23;2:24.PMID: 17956616 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    The Biological Big Bang model for the major transitions in evolution.

    Koonin EV.

    Biol Direct. 2007 Aug 20;2:21.PMID: 17708768 [PubMed - indexed for MEDLINE]Related articlesFree article

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