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Results: 1 to 20 of 42

1.

Phylogeography and niche modelling of the relict plant Amborella trichopoda (Amborellaceae) reveal multiple Pleistocene refugia in New Caledonia.

Poncet V, Munoz F, Munzinger J, Pillon Y, Gomez C, Couderc M, Tranchant-Dubreuil C, Hamon S, de Kochko A.

Mol Ecol. 2013 Dec;22(24):6163-78. doi: 10.1111/mec.12554. Epub 2013 Nov 11.

PMID:
24118476
[PubMed - indexed for MEDLINE]
2.

BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution.

Dereeper A, Guyot R, Tranchant-Dubreuil C, Anthony F, Argout X, de Bellis F, Combes MC, Gavory F, de Kochko A, Kudrna D, Leroy T, Poulain J, Rondeau M, Song X, Wing R, Lashermes P.

Plant Mol Biol. 2013 Oct;83(3):177-89. doi: 10.1007/s11103-013-0077-5. Epub 2013 May 25.

PMID:
23708951
[PubMed - indexed for MEDLINE]
3.

Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites.

Razafinarivo NJ, Guyot R, Davis AP, Couturon E, Hamon S, Crouzillat D, Rigoreau M, Dubreuil-Tranchant C, Poncet V, De Kochko A, Rakotomalala JJ, Hamon P.

Ann Bot. 2013 Feb;111(2):229-48. doi: 10.1093/aob/mcs283. Epub 2012 Dec 28.

PMID:
23275631
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Microsatellite markers for Amborella (Amborellaceae), a monotypic genus endemic to New Caledonia.

Poncet V, Couderc M, Tranchant-Dubreuil C, Gomez C, Hamon P, Hamon S, Pillon Y, Munzinger J, de Kochko A.

Am J Bot. 2012 Oct;99(10):e411-4. doi: 10.3732/ajb.1200131. Epub 2012 Oct 1.

PMID:
23028001
[PubMed - indexed for MEDLINE]
Free Article
5.

Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades.

Guyot R, Lefebvre-Pautigny F, Tranchant-Dubreuil C, Rigoreau M, Hamon P, Leroy T, Hamon S, Poncet V, Crouzillat D, de Kochko A.

BMC Genomics. 2012 Mar 20;13:103. doi: 10.1186/1471-2164-13-103.

PMID:
22433423
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae).

Lepelley M, Mahesh V, McCarthy J, Rigoreau M, Crouzillat D, Chabrillange N, de Kochko A, Campa C.

Planta. 2012 Jul;236(1):313-26. doi: 10.1007/s00425-012-1613-2. Epub 2012 Feb 21.

PMID:
22349733
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Site-Specific Insertion Polymorphism of the MITE Alex-1 in the Genus Coffea Suggests Interspecific Gene Flow.

Dubreuil-Tranchant C, Guyot R, Guellim A, Duret C, de la Mare M, Razafinarivo N, Poncet V, Hamon S, Hamon P, de Kochko A.

Int J Evol Biol. 2011;2011:358412. doi: 10.4061/2011/358412. Epub 2011 Sep 27.

PMID:
21961075
[PubMed]
Free PMC Article
8.

Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae).

Hamon P, Duroy PO, Dubreuil-Tranchant C, Mafra D'Almeida Costa P, Duret C, Razafinarivo NJ, Couturon E, Hamon S, de Kochko A, Poncet V, Guyot R.

Mol Genet Genomics. 2011 Jun;285(6):447-60. doi: 10.1007/s00438-011-0617-0. Epub 2011 Apr 20.

PMID:
21505885
[PubMed - indexed for MEDLINE]
9.

Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea).

Yu Q, Guyot R, de Kochko A, Byers A, Navajas-Pérez R, Langston BJ, Dubreuil-Tranchant C, Paterson AH, Poncet V, Nagai C, Ming R.

Plant J. 2011 Jul;67(2):305-17. doi: 10.1111/j.1365-313X.2011.04590.x. Epub 2011 May 12.

PMID:
21457367
[PubMed - indexed for MEDLINE]
10.

The 'PUCE CAFE' Project: the first 15K coffee microarray, a new tool for discovering candidate genes correlated to agronomic and quality traits.

Privat I, Bardil A, Gomez AB, Severac D, Dantec C, Fuentes I, Mueller L, Joët T, Pot D, Foucrier S, Dussert S, Leroy T, Journot L, de Kochko A, Campa C, Combes MC, Lashermes P, Bertrand B.

BMC Genomics. 2011 Jan 5;12:5. doi: 10.1186/1471-2164-12-5.

PMID:
21208403
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

MoccaDB - an integrative database for functional, comparative and diversity studies in the Rubiaceae family.

Plechakova O, Tranchant-Dubreuil C, Benedet F, Couderc M, Tinaut A, Viader V, De Block P, Hamon P, Campa C, de Kochko A, Hamon S, Poncet V.

BMC Plant Biol. 2009 Sep 29;9:123. doi: 10.1186/1471-2229-9-123.

PMID:
19788737
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Physical mapping of rDNA and heterochromatin in chromosomes of 16 Coffea species: a revised view of species differentiation.

Hamon P, Siljak-Yakovlev S, Srisuwan S, Robin O, Poncet V, Hamon S, de Kochko A.

Chromosome Res. 2009;17(3):291-304. doi: 10.1007/s10577-009-9033-2. Epub 2009 Mar 31.

PMID:
19333769
[PubMed - indexed for MEDLINE]
13.

Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.

Guyot R, de la Mare M, Viader V, Hamon P, Coriton O, Bustamante-Porras J, Poncet V, Campa C, Hamon S, de Kochko A.

BMC Plant Biol. 2009 Feb 25;9:22. doi: 10.1186/1471-2229-9-22.

PMID:
19243618
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Metabolic pathways in tropical dicotyledonous albuminous seeds: Coffea arabica as a case study.

Joët T, Laffargue A, Salmona J, Doulbeau S, Descroix F, Bertrand B, de Kochko A, Dussert S.

New Phytol. 2009;182(1):146-62. doi: 10.1111/j.1469-8137.2008.02742.x. Epub 2009 Jan 21.

PMID:
19207685
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Effectiveness of the fatty acid and sterol composition of seeds for the chemotaxonomy of Coffea subgenus Coffea.

Dussert S, Laffargue A, de Kochko A, Joët T.

Phytochemistry. 2008 Dec;69(17):2950-60. doi: 10.1016/j.phytochem.2008.09.021. Epub 2008 Nov 6.

PMID:
18995872
[PubMed - indexed for MEDLINE]
16.

Near immunity to rice tungro spherical virus achieved in rice by a replicase-mediated resistance strategy.

Huet H, Mahendra S, Wang J, Sivamani E, Ong CA, Chen L, de Kochko A, Beachy RN, Fauquet C.

Phytopathology. 1999 Nov;89(11):1022-7. doi: 10.1094/PHYTO.1999.89.11.1022.

PMID:
18944657
[PubMed]
Free Article
17.

Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species.

Poncet V, Dufour M, Hamon P, Hamon S, de Kochko A, Leroy T.

Genome. 2007 Dec;50(12):1156-61.

PMID:
18059542
[PubMed - indexed for MEDLINE]
18.

Deciphering transcriptional networks that govern Coffea arabica seed development using combined cDNA array and real-time RT-PCR approaches.

Salmona J, Dussert S, Descroix F, de Kochko A, Bertrand B, Joët T.

Plant Mol Biol. 2008 Jan;66(1-2):105-24. Epub 2007 Nov 15.

PMID:
18026845
[PubMed - indexed for MEDLINE]
19.

Development of solid-phase extraction and methylation procedures to analyse free fatty acids in lipid-rich seeds.

Laffargue A, de Kochko A, Dussert S.

Plant Physiol Biochem. 2007 Mar-Apr;45(3-4):250-7. Epub 2007 Jan 30.

PMID:
17360190
[PubMed - indexed for MEDLINE]
20.

Functional characterization of two p-coumaroyl ester 3'-hydroxylase genes from coffee tree: evidence of a candidate for chlorogenic acid biosynthesis.

Mahesh V, Million-Rousseau R, Ullmann P, Chabrillange N, Bustamante J, Mondolot L, Morant M, Noirot M, Hamon S, de Kochko A, Werck-Reichhart D, Campa C.

Plant Mol Biol. 2007 May;64(1-2):145-59. Epub 2007 Feb 27.

PMID:
17333503
[PubMed - indexed for MEDLINE]

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