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Results: 1 to 20 of 106

1.

Gene network inference by fusing data from diverse distributions.

Žitnik M, Zupan B.

Bioinformatics. 2015 Jun 15;31(12):i230-i239. doi: 10.1093/bioinformatics/btv258.

2.

Exploration of a new tool for assessing emotional inferencing after traumatic brain injury.

Zupan B, Neumann D, Babbage DR, Willer B.

Brain Inj. 2015;29(7-8):877-87. doi: 10.3109/02699052.2015.1011233. Epub 2015 May 7.

PMID:
25950265
3.

Leaps and lulls in the developmental transcriptome of Dictyostelium discoideum.

Rosengarten RD, Santhanam B, Fuller D, Katoh-Kurasawa M, Loomis WF, Zupan B, Shaulsky G.

BMC Genomics. 2015 Apr 13;16:294. doi: 10.1186/s12864-015-1491-7.

4.

Genome-Wide Localization Study of Yeast Pex11 Identifies Peroxisome-Mitochondria Interactions through the ERMES Complex.

Mattiazzi Ušaj M, Brložnik M, Kaferle P, Žitnik M, Wolinski H, Leitner F, Kohlwein SD, Zupan B, Petrovič U.

J Mol Biol. 2015 Jun 5;427(11):2072-87. doi: 10.1016/j.jmb.2015.03.004. Epub 2015 Mar 10.

5.

Data Imputation in Epistatic MAPs by Network-Guided Matrix Completion.

Žitnik M, Zupan B.

J Comput Biol. 2015 Jun;22(6):595-608. doi: 10.1089/cmb.2014.0158. Epub 2015 Feb 6.

PMID:
25658751
6.

Heterogeneous computing architecture for fast detection of SNP-SNP interactions.

Sluga D, Curk T, Zupan B, Lotric U.

BMC Bioinformatics. 2014 Jun 25;15:216. doi: 10.1186/1471-2105-15-216.

7.

Gene network inference by probabilistic scoring of relationships from a factorized model of interactions.

Zitnik M, Župan B.

Bioinformatics. 2014 Jun 15;30(12):i246-i254. doi: 10.1093/bioinformatics/btu287.

8.

A randomized controlled trial of emotion recognition training after traumatic brain injury.

Neumann D, Babbage DR, Zupan B, Willer B.

J Head Trauma Rehabil. 2015 May-Jun;30(3):E12-23. doi: 10.1097/HTR.0000000000000054.

PMID:
24842590
9.

Computational models reveal genotype-phenotype associations in Saccharomyces cerevisiae.

Franco-Duarte R, Mendes I, Umek L, Drumonde-Neves J, Zupan B, Schuller D.

Yeast. 2014 Jul;31(7):265-77. doi: 10.1002/yea.3016. Epub 2014 May 26.

PMID:
24752995
10.

Integrative clustering by nonnegative matrix factorization can reveal coherent functional groups from gene profile data.

Brdar S, Crnojević V, Zupan B.

IEEE J Biomed Health Inform. 2015 Mar;19(2):698-708. doi: 10.1109/JBHI.2014.2316508. Epub 2014 Apr 10.

PMID:
24733033
11.

Recognition of facial and vocal affect following traumatic brain injury.

Zupan B, Babbage D, Neumann D, Willer B.

Brain Inj. 2014;28(8):1087-95. doi: 10.3109/02699052.2014.901560. Epub 2014 Apr 4.

PMID:
24701988
12.

KCNQ1, KCNE2, and Na+-coupled solute transporters form reciprocally regulating complexes that affect neuronal excitability.

Abbott GW, Tai KK, Neverisky DL, Hansler A, Hu Z, Roepke TK, Lerner DJ, Chen Q, Liu L, Zupan B, Toth M, Haynes R, Huang X, Demirbas D, Buccafusca R, Gross SS, Kanda VA, Berry GT.

Sci Signal. 2014 Mar 4;7(315):ra22. doi: 10.1126/scisignal.2005025.

13.

Crosslinking-immunoprecipitation (iCLIP) analysis reveals global regulatory roles of hnRNP L.

Rossbach O, Hung LH, Khrameeva E, Schreiner S, König J, Curk T, Zupan B, Ule J, Gelfand MS, Bindereif A.

RNA Biol. 2014;11(2):146-55. doi: 10.4161/rna.27991. Epub 2014 Feb 7.

14.

Assessment of machine learning reliability methods for quantifying the applicability domain of QSAR regression models.

Toplak M, Močnik R, Polajnar M, Bosnić Z, Carlsson L, Hasselgren C, Demšar J, Boyer S, Zupan B, Stålring J.

J Chem Inf Model. 2014 Feb 24;54(2):431-41. doi: 10.1021/ci4006595. Epub 2014 Feb 11.

PMID:
24490838
15.
16.

Maternal hematopoietic TNF, via milk chemokines, programs hippocampal development and memory.

Liu B, Zupan B, Laird E, Klein S, Gleason G, Bozinoski M, Gal Toth J, Toth M.

Nat Neurosci. 2014 Jan;17(1):97-105. doi: 10.1038/nn.3596. Epub 2013 Dec 1.

PMID:
24292233
17.

Discovering disease-disease associations by fusing systems-level molecular data.

Žitnik M, Janjić V, Larminie C, Zupan B, Pržulj N.

Sci Rep. 2013 Nov 15;3:3202. doi: 10.1038/srep03202.

18.

Affect recognition in traumatic brain injury: responses to unimodal and multimodal media.

Zupan B, Neumann D.

J Head Trauma Rehabil. 2014 Jul-Aug;29(4):E1-E12. doi: 10.1097/HTR.0b013e31829dded6.

PMID:
23982789
19.

ABC transporters in Dictyostelium discoideum development.

Miranda ER, Zhuchenko O, Toplak M, Santhanam B, Zupan B, Kuspa A, Shaulsky G.

PLoS One. 2013 Aug 14;8(8):e70040. doi: 10.1371/journal.pone.0070040. eCollection 2013.

20.

The relationship between facial affect recognition and cognitive functioning after traumatic brain injury.

Yim J, Babbage DR, Zupan B, Neumann D, Willer B.

Brain Inj. 2013;27(10):1155-61. doi: 10.3109/02699052.2013.804203. Epub 2013 Jul 29.

PMID:
23895556
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