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Results: 12

1.

Insights from the cold transcriptome of Physcomitrella patens: global specialization pattern of conserved transcriptional regulators and identification of orphan genes involved in cold acclimation.

Beike AK, Lang D, Zimmer AD, Wüst F, Trautmann D, Wiedemann G, Beyer P, Decker EL, Reski R.

New Phytol. 2014 Sep 10. doi: 10.1111/nph.13004. [Epub ahead of print]

PMID:
25209349
[PubMed - as supplied by publisher]
2.

Multiple inputs control sulfur-containing amino acid synthesis in Saccharomyces cerevisiae.

Sadhu MJ, Moresco JJ, Zimmer AD, Yates JR 3rd, Rine J.

Mol Biol Cell. 2014 May;25(10):1653-65. doi: 10.1091/mbc.E13-12-0755. Epub 2014 Mar 19.

PMID:
24648496
[PubMed - in process]
Free PMC Article
3.

Quantitative analysis of the mitochondrial and plastid proteomes of the moss Physcomitrella patens reveals protein macrocompartmentation and microcompartmentation.

Mueller SJ, Lang D, Hoernstein SN, Lang EG, Schuessele C, Schmidt A, Fluck M, Leisibach D, Niegl C, Zimmer AD, Schlosser A, Reski R.

Plant Physiol. 2014 Apr;164(4):2081-95. doi: 10.1104/pp.114.235754. Epub 2014 Feb 10.

PMID:
24515833
[PubMed - in process]
Free PMC Article
4.

ppdb: plant promoter database version 3.0.

Hieno A, Naznin HA, Hyakumachi M, Sakurai T, Tokizawa M, Koyama H, Sato N, Nishiyama T, Hasebe M, Zimmer AD, Lang D, Reski R, Rensing SA, Obokata J, Yamamoto YY.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1188-92. doi: 10.1093/nar/gkt1027. Epub 2013 Nov 4.

PMID:
24194597
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions.

Zimmer AD, Lang D, Buchta K, Rombauts S, Nishiyama T, Hasebe M, Van de Peer Y, Rensing SA, Reski R.

BMC Genomics. 2013 Jul 23;14:498. doi: 10.1186/1471-2164-14-498.

PMID:
23879659
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The relevance of compartmentation for cysteine synthesis in phototrophic organisms.

Birke H, Müller SJ, Rother M, Zimmer AD, Hoernstein SN, Wesenberg D, Wirtz M, Krauss GJ, Reski R, Hell R.

Protoplasma. 2012 Jun;249 Suppl 2:S147-55. doi: 10.1007/s00709-012-0411-9. Epub 2012 Apr 29. Review.

PMID:
22543690
[PubMed - indexed for MEDLINE]
7.

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.

Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, dePamphilis C, Albert VA, Aono N, Aoyama T, Ambrose BA, Ashton NW, Axtell MJ, Barker E, Barker MS, Bennetzen JL, Bonawitz ND, Chapple C, Cheng C, Correa LG, Dacre M, DeBarry J, Dreyer I, Elias M, Engstrom EM, Estelle M, Feng L, Finet C, Floyd SK, Frommer WB, Fujita T, Gramzow L, Gutensohn M, Harholt J, Hattori M, Heyl A, Hirai T, Hiwatashi Y, Ishikawa M, Iwata M, Karol KG, Koehler B, Kolukisaoglu U, Kubo M, Kurata T, Lalonde S, Li K, Li Y, Litt A, Lyons E, Manning G, Maruyama T, Michael TP, Mikami K, Miyazaki S, Morinaga S, Murata T, Mueller-Roeber B, Nelson DR, Obara M, Oguri Y, Olmstead RG, Onodera N, Petersen BL, Pils B, Prigge M, Rensing SA, Riaño-Pachón DM, Roberts AW, Sato Y, Scheller HV, Schulz B, Schulz C, Shakirov EV, Shibagaki N, Shinohara N, Shippen DE, Sørensen I, Sotooka R, Sugimoto N, Sugita M, Sumikawa N, Tanurdzic M, Theissen G, Ulvskov P, Wakazuki S, Weng JK, Willats WW, Wipf D, Wolf PG, Yang L, Zimmer AD, Zhu Q, Mitros T, Hellsten U, Loqué D, Otillar R, Salamov A, Schmutz J, Shapiro H, Lindquist E, Lucas S, Rokhsar D, Grigoriev IV.

Science. 2011 May 20;332(6032):960-3. doi: 10.1126/science.1203810. Epub 2011 May 5.

PMID:
21551031
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Large impact of the apoplast on somatic embryogenesis in Cyclamen persicum offers possibilities for improved developmental control in vitro.

Hoenemann C, Richardt S, Krüger K, Zimmer AD, Hohe A, Rensing SA.

BMC Plant Biol. 2010 Apr 28;10:77. doi: 10.1186/1471-2229-10-77.

PMID:
20426818
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Identification and characterization of NAGNAG alternative splicing in the moss Physcomitrella patens.

Sinha R, Zimmer AD, Bolte K, Lang D, Reski R, Platzer M, Rensing SA, Backofen R.

BMC Plant Biol. 2010 Apr 28;10:76. doi: 10.1186/1471-2229-10-76.

PMID:
20426810
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A uniquely high number of ftsZ genes in the moss Physcomitrella patens.

Martin A, Lang D, Heckmann J, Zimmer AD, Vervliet-Scheebaum M, Reski R.

Plant Biol (Stuttg). 2009 Sep;11(5):744-50. doi: 10.1111/j.1438-8677.2008.00174.x.

PMID:
19689782
[PubMed - indexed for MEDLINE]
11.

Exploring plant biodiversity: the Physcomitrella genome and beyond.

Lang D, Zimmer AD, Rensing SA, Reski R.

Trends Plant Sci. 2008 Oct;13(10):542-9. doi: 10.1016/j.tplants.2008.07.002. Epub 2008 Aug 30. Review.

PMID:
18762443
[PubMed - indexed for MEDLINE]
12.

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.

Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H, Nishiyama T, Perroud PF, Lindquist EA, Kamisugi Y, Tanahashi T, Sakakibara K, Fujita T, Oishi K, Shin-I T, Kuroki Y, Toyoda A, Suzuki Y, Hashimoto S, Yamaguchi K, Sugano S, Kohara Y, Fujiyama A, Anterola A, Aoki S, Ashton N, Barbazuk WB, Barker E, Bennetzen JL, Blankenship R, Cho SH, Dutcher SK, Estelle M, Fawcett JA, Gundlach H, Hanada K, Heyl A, Hicks KA, Hughes J, Lohr M, Mayer K, Melkozernov A, Murata T, Nelson DR, Pils B, Prigge M, Reiss B, Renner T, Rombauts S, Rushton PJ, Sanderfoot A, Schween G, Shiu SH, Stueber K, Theodoulou FL, Tu H, Van de Peer Y, Verrier PJ, Waters E, Wood A, Yang L, Cove D, Cuming AC, Hasebe M, Lucas S, Mishler BD, Reski R, Grigoriev IV, Quatrano RS, Boore JL.

Science. 2008 Jan 4;319(5859):64-9. Epub 2007 Dec 13.

PMID:
18079367
[PubMed - indexed for MEDLINE]
Free Article

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