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Results: 1 to 20 of 36

1.

Anciently duplicated genes reduce uncertainty in molecular clock estimates.

Zhaxybayeva O.

Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12168-9. doi: 10.1073/pnas.1310930110. Epub 2013 Jul 10. No abstract available.

PMID:
23842092
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Photosystem II protein clearance and FtsH function in the diatom Thalassiosira pseudonana.

Campbell DA, Hossain Z, Cockshutt AM, Zhaxybayeva O, Wu H, Li G.

Photosynth Res. 2013 May;115(1):43-54. doi: 10.1007/s11120-013-9809-2. Epub 2013 Mar 16.

PMID:
23504483
[PubMed - indexed for MEDLINE]
3.

Cell sorting analysis of geographically separated hypersaline environments.

Zhaxybayeva O, Stepanauskas R, Mohan NR, Papke RT.

Extremophiles. 2013 Mar;17(2):265-75. doi: 10.1007/s00792-013-0514-z. Epub 2013 Jan 29.

PMID:
23358730
[PubMed - indexed for MEDLINE]
4.

Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date.

Zhaxybayeva O, Swithers KS, Foght J, Green AG, Bruce D, Detter C, Han S, Teshima H, Han J, Woyke T, Pitluck S, Nolan M, Ivanova N, Pati A, Land ML, Dlutek M, Doolittle WF, Noll KM, Nesbø CL.

Genome Biol Evol. 2012;4(8):700-8. doi: 10.1093/gbe/evs059. Epub 2012 Jul 12.

PMID:
22798451
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Gene transfer agents: phage-like elements of genetic exchange.

Lang AS, Zhaxybayeva O, Beatty JT.

Nat Rev Microbiol. 2012 Jun 11;10(7):472-82. doi: 10.1038/nrmicro2802. Review.

PMID:
22683880
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Quartet decomposition server: a platform for analyzing phylogenetic trees.

Mao F, Williams D, Zhaxybayeva O, Poptsova M, Lapierre P, Gogarten JP, Xu Y.

BMC Bioinformatics. 2012 Jun 7;13:123.

PMID:
22676320
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Lateral gene transfer.

Zhaxybayeva O, Doolittle WF.

Curr Biol. 2011 Apr 12;21(7):R242-6. doi: 10.1016/j.cub.2011.01.045. No abstract available.

PMID:
21481756
[PubMed - indexed for MEDLINE]
Free Article
8.

On the origin of prokaryotic species.

Doolittle WF, Zhaxybayeva O.

Genome Res. 2009 May;19(5):744-56. doi: 10.1101/gr.086645.108. Review.

PMID:
19411599
[PubMed - indexed for MEDLINE]
Free Article
9.

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.

Zhaxybayeva O, Swithers KS, Lapierre P, Fournier GP, Bickhart DM, DeBoy RT, Nelson KE, Nesbø CL, Doolittle WF, Gogarten JP, Noll KM.

Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5865-70. doi: 10.1073/pnas.0901260106. Epub 2009 Mar 23.

PMID:
19307556
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Detection and quantitative assessment of horizontal gene transfer.

Zhaxybayeva O.

Methods Mol Biol. 2009;532:195-213. doi: 10.1007/978-1-60327-853-9_11.

PMID:
19271186
[PubMed - indexed for MEDLINE]
11.

The genome of Thermosipho africanus TCF52B: lateral genetic connections to the Firmicutes and Archaea.

Nesbø CL, Bapteste E, Curtis B, Dahle H, Lopez P, Macleod D, Dlutek M, Bowman S, Zhaxybayeva O, Birkeland NK, Doolittle WF.

J Bacteriol. 2009 Mar;191(6):1974-8. doi: 10.1128/JB.01448-08. Epub 2009 Jan 5.

PMID:
19124572
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Intertwined evolutionary histories of marine Synechococcus and Prochlorococcus marinus.

Zhaxybayeva O, Doolittle WF, Papke RT, Gogarten JP.

Genome Biol Evol. 2009 Sep 2;1:325-39. doi: 10.1093/gbe/evp032.

PMID:
20333202
[PubMed]
Free PMC Article
13.

Unsupervised learning in detection of gene transfer.

Hamel L, Nahar N, Poptsova MS, Zhaxybayeva O, Gogarten JP.

J Biomed Biotechnol. 2008;2008:472719. doi: 10.1155/2008/472719.

PMID:
18509479
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Actinorhodopsins: proteorhodopsin-like gene sequences found predominantly in non-marine environments.

Sharma AK, Zhaxybayeva O, Papke RT, Doolittle WF.

Environ Microbiol. 2008 Apr;10(4):1039-56. doi: 10.1111/j.1462-2920.2007.01525.x. Epub 2008 Jan 24.

PMID:
18218036
[PubMed - indexed for MEDLINE]
15.

Integron-associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments.

Koenig JE, Boucher Y, Charlebois RL, Nesbø C, Zhaxybayeva O, Bapteste E, Spencer M, Joss MJ, Stokes HW, Doolittle WF.

Environ Microbiol. 2008 Apr;10(4):1024-38. doi: 10.1111/j.1462-2920.2007.01524.x. Epub 2008 Jan 7.

PMID:
18190517
[PubMed - indexed for MEDLINE]
16.

Genomic plasticity in prokaryotes: the case of the square haloarchaeon.

Cuadros-Orellana S, Martin-Cuadrado AB, Legault B, D'Auria G, Zhaxybayeva O, Papke RT, Rodriguez-Valera F.

ISME J. 2007 Jul;1(3):235-45. Epub 2007 May 31.

PMID:
18043634
[PubMed - indexed for MEDLINE]
17.

Searching for species in haloarchaea.

Papke RT, Zhaxybayeva O, Feil EJ, Sommerfeld K, Muise D, Doolittle WF.

Proc Natl Acad Sci U S A. 2007 Aug 28;104(35):14092-7. Epub 2007 Aug 21.

PMID:
17715057
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Evolution: reducible complexity -- the case for bacterial flagella.

Doolittle WF, Zhaxybayeva O.

Curr Biol. 2007 Jul 3;17(13):R510-2.

PMID:
17610831
[PubMed - indexed for MEDLINE]
Free Article
19.

A hyperconserved protein in Prochlorococcus and marine Synechococcus.

Zhaxybayeva O, Gogarten JP, Doolittle WF.

FEMS Microbiol Lett. 2007 Sep;274(1):30-4. Epub 2007 Jun 15.

PMID:
17573933
[PubMed - indexed for MEDLINE]
20.

Systematic overestimation of gene gain through false diagnosis of gene absence.

Zhaxybayeva O, Nesbø CL, Doolittle WF.

Genome Biol. 2007;8(2):402.

PMID:
17328791
[PubMed - indexed for MEDLINE]
Free PMC Article

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