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Results: 1 to 20 of 41

1.

Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.).

Varshney RK, Mir RR, Bhatia S, Thudi M, Hu Y, Azam S, Zhang Y, Jaganathan D, You FM, Gao J, Riera-Lizarazu O, Luo MC.

Funct Integr Genomics. 2014 Mar;14(1):59-73. doi: 10.1007/s10142-014-0363-6. Epub 2014 Mar 8.

PMID:
24610029
[PubMed - in process]
2.

SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors.

Ren J, Chen L, Sun D, You FM, Wang J, Peng Y, Nevo E, Beiles A, Sun D, Luo MC, Peng J.

BMC Evol Biol. 2013 Aug 13;13:169. doi: 10.1186/1471-2148-13-169.

PMID:
23937410
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genetic variation of six desaturase genes in flax and their impact on fatty acid composition.

Thambugala D, Duguid S, Loewen E, Rowland G, Booker H, You FM, Cloutier S.

Theor Appl Genet. 2013 Oct;126(10):2627-41. doi: 10.1007/s00122-013-2161-2. Epub 2013 Aug 9.

PMID:
23928861
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Arguments for standardizing transposable element annotation in plant genomes.

Ragupathy R, You FM, Cloutier S.

Trends Plant Sci. 2013 Jul;18(7):367-76. doi: 10.1016/j.tplants.2013.03.005. Epub 2013 Apr 23. Review.

PMID:
23618952
[PubMed - indexed for MEDLINE]
5.

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor.

Luo MC, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KF, Sehgal SK, Li W, Gill BS, Bevan MW, Simková H, Dolezel J, Weining S, Lazo GR, Anderson OD, Dvorak J.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7940-5. doi: 10.1073/pnas.1219082110. Epub 2013 Apr 22.

PMID:
23610408
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genetic diversity revealed by single nucleotide polymorphism markers in a worldwide germplasm collection of durum wheat.

Ren J, Sun D, Chen L, You FM, Wang J, Peng Y, Nevo E, Sun D, Luo MC, Peng J.

Int J Mol Sci. 2013 Mar 28;14(4):7061-88. doi: 10.3390/ijms14047061.

PMID:
23538839
[PubMed]
Free PMC Article
7.

Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat.

Wang J, Luo MC, Chen Z, You FM, Wei Y, Zheng Y, Dvorak J.

New Phytol. 2013 May;198(3):925-37. doi: 10.1111/nph.12164. Epub 2013 Feb 4.

PMID:
23374069
[PubMed - indexed for MEDLINE]
8.

Insular organization of gene space in grass genomes.

Gottlieb A, Müller HG, Massa AN, Wanjugi H, Deal KR, You FM, Xu X, Gu YQ, Luo MC, Anderson OD, Chan AP, Rabinowicz P, Devos KM, Dvorak J.

PLoS One. 2013;8(1):e54101. doi: 10.1371/journal.pone.0054101. Epub 2013 Jan 11.

PMID:
23326580
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome wide SNP discovery in flax through next generation sequencing of reduced representation libraries.

Kumar S, You FM, Cloutier S.

BMC Genomics. 2012 Dec 6;13:684. doi: 10.1186/1471-2164-13-684.

PMID:
23216845
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

PIECE: a database for plant gene structure comparison and evolution.

Wang Y, You FM, Lazo GR, Luo MC, Thilmony R, Gordon S, Kianian SF, Gu YQ.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1159-66. doi: 10.1093/nar/gks1109. Epub 2012 Nov 24.

PMID:
23180792
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms.

You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J.

BMC Genomics. 2012 Jul 31;13:354. doi: 10.1186/1471-2164-13-354.

PMID:
22849334
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The origin of spelt and free-threshing hexaploid wheat.

Dvorak J, Deal KR, Luo MC, You FM, von Borstel K, Dehghani H.

J Hered. 2012 May-Jun;103(3):426-41. doi: 10.1093/jhered/esr152. Epub 2012 Feb 29.

PMID:
22378960
[PubMed - indexed for MEDLINE]
Free Article
13.

Characterizing the walnut genome through analyses of BAC end sequences.

Wu J, Gu YQ, Hu Y, You FM, Dandekar AM, Leslie CA, Aradhya M, Dvorak J, Luo MC.

Plant Mol Biol. 2012 Jan;78(1-2):95-107. doi: 10.1007/s11103-011-9849-y. Epub 2011 Nov 19.

PMID:
22101470
[PubMed - indexed for MEDLINE]
14.

A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes.

Palti Y, Genet C, Gao G, Hu Y, You FM, Boussaha M, Rexroad CE 3rd, Luo MC.

Mar Biotechnol (NY). 2012 Jun;14(3):343-57. doi: 10.1007/s10126-011-9418-z. Epub 2011 Nov 19.

PMID:
22101344
[PubMed - indexed for MEDLINE]
15.

Mapping and validation of quantitative trait loci associated with wheat yellow mosaic bymovirus resistance in bread wheat.

Zhu X, Wang H, Guo J, Wu Z, Cao A, Bie T, Nie M, You FM, Cheng Z, Xiao J, Liu Y, Cheng S, Chen P, Wang X.

Theor Appl Genet. 2012 Jan;124(1):177-88. doi: 10.1007/s00122-011-1696-3. Epub 2011 Sep 30.

PMID:
21959905
[PubMed - indexed for MEDLINE]
16.

Comparison of a high-density genetic linkage map to genome features in the model grass Brachypodium distachyon.

Huo N, Garvin DF, You FM, McMahon S, Luo MC, Gu YQ, Lazo GR, Vogel JP.

Theor Appl Genet. 2011 Aug;123(3):455-64. doi: 10.1007/s00122-011-1598-4. Epub 2011 May 20.

PMID:
21597976
[PubMed - indexed for MEDLINE]
17.

Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes.

Massa AN, Wanjugi H, Deal KR, O'Brien K, You FM, Maiti R, Chan AP, Gu YQ, Luo MC, Anderson OD, Rabinowicz PD, Dvorak J, Devos KM.

Mol Biol Evol. 2011 Sep;28(9):2537-47. doi: 10.1093/molbev/msr080. Epub 2011 Apr 6.

PMID:
21470968
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Collinearity-based marker mining for the fine mapping of Pm6, a powdery mildew resistance gene in wheat.

Qin B, Cao A, Wang H, Chen T, You FM, Liu Y, Ji J, Liu D, Chen P, Wang XE.

Theor Appl Genet. 2011 Jul;123(2):207-18. doi: 10.1007/s00122-011-1577-9. Epub 2011 Apr 6.

PMID:
21468676
[PubMed - indexed for MEDLINE]
19.

BAC libraries from wheat chromosome 7D: efficient tool for positional cloning of aphid resistance genes.

Simková H, Safář J, Kubaláková M, Suchánková P, Cíhalíková J, Robert-Quatre H, Azhaguvel P, Weng Y, Peng J, Lapitan NL, Ma Y, You FM, Luo MC, Bartoš J, Doležel J.

J Biomed Biotechnol. 2011;2011:302543. doi: 10.1155/2011/302543. Epub 2010 Dec 23.

PMID:
21318113
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without a reference genome sequence.

You FM, Huo N, Deal KR, Gu YQ, Luo MC, McGuire PE, Dvorak J, Anderson OD.

BMC Genomics. 2011 Jan 25;12:59. doi: 10.1186/1471-2164-12-59.

PMID:
21266061
[PubMed - indexed for MEDLINE]
Free PMC Article

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