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Results: 1 to 20 of 24

1.

Genome-wide normalized score: a novel algorithm to detect fetal trisomy 21 during non-invasive prenatal testing.

Yeang CH, Ma GC, Hsu HW, Lin YS, Chang SM, Cheng PJ, Chen CA, Ni YH, Chen M.

Ultrasound Obstet Gynecol. 2014 Jul;44(1):25-30. doi: 10.1002/uog.13377. Epub 2014 Jun 12.

PMID:
24700679
[PubMed - in process]
2.

Suppression of the SOX2 neural effector gene by PRDM1 promotes human germ cell fate in embryonic stem cells.

Lin IY, Chiu FL, Yeang CH, Chen HF, Chuang CY, Yang SY, Hou PS, Sintupisut N, Ho HN, Kuo HC, Lin KI.

Stem Cell Reports. 2014 Jan 23;2(2):189-204. doi: 10.1016/j.stemcr.2013.12.009. eCollection 2014 Feb 11.

PMID:
24527393
[PubMed - in process]
Free PMC Article
3.

An integrative characterization of recurrent molecular aberrations in glioblastoma genomes.

Sintupisut N, Liu PL, Yeang CH.

Nucleic Acids Res. 2013 Oct;41(19):8803-21. doi: 10.1093/nar/gkt656. Epub 2013 Jul 31.

PMID:
23907387
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Functional characterization of motif sequences under purifying selection.

Chen DH, Chang AY, Liao BY, Yeang CH.

Nucleic Acids Res. 2013 Feb 1;41(4):2105-20. doi: 10.1093/nar/gks1456. Epub 2013 Jan 8.

PMID:
23303791
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evolution of domain architectures and catalytic functions of enzymes in metabolic systems.

Suen S, Lu HH, Yeang CH.

Genome Biol Evol. 2012;4(9):976-93. doi: 10.1093/gbe/evs072. Epub 2012 Aug 30.

PMID:
22936075
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Impact of genetic dynamics and single-cell heterogeneity on development of nonstandard personalized medicine strategies for cancer.

Beckman RA, Schemmann GS, Yeang CH.

Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14586-91. doi: 10.1073/pnas.1203559109. Epub 2012 Aug 13.

PMID:
22891318
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genome-wide gene expression analysis implicates the immune response and lymphangiogenesis in the pathogenesis of fetal chylothorax.

Yeang CH, Ma GC, Shih JC, Yang YS, Chen CP, Chang SP, Wu SH, Liu CS, Kuo SJ, Chou HC, Hwu WL, Cameron AD, Ginsberg NA, Lin YS, Chen M.

PLoS One. 2012;7(4):e34901. doi: 10.1371/journal.pone.0034901. Epub 2012 Apr 18.

PMID:
22529953
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Deciphering causal and statistical relations of molecular aberrations and gene expressions in NCI-60 cell lines.

Li SD, Tagami T, Ho YF, Yeang CH.

BMC Syst Biol. 2011 Nov 4;5:186. doi: 10.1186/1752-0509-5-186.

PMID:
22051105
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

An integrated analysis of molecular aberrations in NCI-60 cell lines.

Yeang CH.

BMC Bioinformatics. 2010 Oct 6;11:495. doi: 10.1186/1471-2105-11-495.

PMID:
20925909
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Integration of metabolic reactions and gene regulation.

Yeang CH.

Mol Biotechnol. 2011 Jan;47(1):70-82. doi: 10.1007/s12033-010-9325-y. Review.

PMID:
20737299
[PubMed - indexed for MEDLINE]
11.

Integration of metabolic reactions and gene regulation.

Yeang CH.

Methods Mol Biol. 2009;553:265-85. doi: 10.1007/978-1-60327-563-7_13. Review.

PMID:
19588110
[PubMed - indexed for MEDLINE]
12.

Inferring disease-related pathways using a probabilistic epistasis model.

Kanabar PN, Vaske CJ, Yeang CH, Yildiz FH, Stuart JM.

Pac Symp Biocomput. 2009:480-91.

PMID:
19209724
[PubMed - indexed for MEDLINE]
Free Article
13.

Identifying coevolving partners from paralogous gene families.

Yeang CH.

Evol Bioinform Online. 2008 Apr 24;4:97-107.

PMID:
19204811
[PubMed]
Free PMC Article
14.

A factor graph nested effects model to identify networks from genetic perturbations.

Vaske CJ, House C, Luu T, Frank B, Yeang CH, Lee NH, Stuart JM.

PLoS Comput Biol. 2009 Jan;5(1):e1000274. doi: 10.1371/journal.pcbi.1000274. Epub 2009 Jan 30.

PMID:
19180177
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Combinatorial patterns of somatic gene mutations in cancer.

Yeang CH, McCormick F, Levine A.

FASEB J. 2008 Aug;22(8):2605-22. doi: 10.1096/fj.08-108985. Epub 2008 Apr 23. Review.

PMID:
18434431
[PubMed - indexed for MEDLINE]
Free Article
16.

Detecting coevolution in and among protein domains.

Yeang CH, Haussler D.

PLoS Comput Biol. 2007 Nov;3(11):e211. Epub 2007 Sep 18.

PMID:
17983264
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Detecting the coevolution of biosequences--an example of RNA interaction prediction.

Yeang CH, Darot JF, Noller HF, Haussler D.

Mol Biol Evol. 2007 Sep;24(9):2119-31. Epub 2007 Jul 17. Erratum in: Mol Biol Evol. 2008 Sep;25(9):2077. Mol Biol Evol. 2007 Oct;24(10):2354.

PMID:
17636042
[PubMed - indexed for MEDLINE]
Free Article
18.

A joint model of regulatory and metabolic networks.

Yeang CH, Vingron M.

BMC Bioinformatics. 2006 Jul 4;7:332.

PMID:
16820044
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Modeling the combinatorial functions of multiple transcription factors.

Yeang CH, Jaakkola T.

J Comput Biol. 2006 Mar;13(2):463-80.

PMID:
16597252
[PubMed - indexed for MEDLINE]
20.

Validation and refinement of gene-regulatory pathways on a network of physical interactions.

Yeang CH, Mak HC, McCuine S, Workman C, Jaakkola T, Ideker T.

Genome Biol. 2005;6(7):R62. Epub 2005 Jul 1.

PMID:
15998451
[PubMed - indexed for MEDLINE]
Free PMC Article
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