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Emergence of clonal hematopoiesis in the majority of patients with acquired aplastic anemia.

Babushok DV, Perdigones N, Perin JC, Olson TS, Ye W, Roth JJ, Lind C, Cattier C, Li Y, Hartung H, Paessler ME, Frank DM, Xie HM, Cross S, Cockroft JD, Podsakoff GM, Monos D, Biegel JA, Mason PJ, Bessler M.

Cancer Genet. 2015 Feb 2. pii: S2210-7762(15)00008-3. doi: 10.1016/j.cancergen.2015.01.007. [Epub ahead of print]


mtDNA Variation and Analysis Using MITOMAP and MITOMASTER.

Lott MT, Leipzig JN, Derbeneva O, Xie HM, Chalkia D, Sarmady M, Procaccio V, Wallace DC.

Curr Protoc Bioinformatics. 2013 Dec 12;1(123):1.23.1-1.23.26.


[FLT3 gene overexpression and its clinical significance in acute myeloid leukemia with AML1/ETO fusion gene positive].

Xie HM, Gao L, Wang N, Xu YY, Shi JL, Yu L, Wang LL.

Zhongguo Shi Yan Xue Ye Xue Za Zhi. 2014 Oct;22(5):1199-205. doi: 10.7534/j.issn.1009-2137.2014.05.002. Chinese.


[GATA-2 gene overexpression and its clinical significance in acute myeloid leukemia with AML1/ETO fusion gene].

Xie HM, Gao L, Wang N, Xu YY, Li YH, Yu L, Wang LL.

Sichuan Da Xue Xue Bao Yi Xue Ban. 2014 Jul;45(4):664-9. Chinese.


Analysis of chromosomal structural variation in patients with congenital left-sided cardiac lesions.

White PS, Xie HM, Werner P, Glessner J, Latney B, Hakonarson H, Goldmuntz E.

Birth Defects Res A Clin Mol Teratol. 2014 Dec;100(12):951-64. doi: 10.1002/bdra.23279. Epub 2014 Jul 26.


Efficient digest of high-throughput sequencing data in a reproducible report.

Zhang Z, Leipzig J, Sasson A, Yu AM, Perin JC, Xie HM, Sarmady M, Warren PV, White PS.

BMC Bioinformatics. 2013;14 Suppl 11:S3. doi: 10.1186/1471-2105-14-S11-S3. Epub 2013 Sep 13.


Single nucleotide polymorphism array analysis of bone marrow failure patients reveals characteristic patterns of genetic changes.

Babushok DV, Xie HM, Roth JJ, Perdigones N, Olson TS, Cockroft JD, Gai X, Perin JC, Li Y, Paessler ME, Hakonarson H, Podsakoff GM, Mason PJ, Biegel JA, Bessler M.

Br J Haematol. 2014 Jan;164(1):73-82. doi: 10.1111/bjh.12603. Epub 2013 Oct 14.


[Antimicrobial susceptibility of community-acquired respiratory tract pathogens isolated from patients in primary hospitals in Shanghai from 2007 to 2010].

Zhou CM, Hu BJ, Gao XD, Bao R, Xie HM, Huang SL, Tao LL, He LX.

Zhonghua Jie He He Hu Xi Za Zhi. 2013 May;36(5):346-50. Chinese.


Hepatic bile acids and bile acid-related gene expression in pregnant and lactating rats.

Zhu QN, Xie HM, Zhang D, Liu J, Lu YF.

PeerJ. 2013 Aug 27;1:e143. doi: 10.7717/peerj.143. eCollection 2013.


[The incidence and risk factors for heterogeneous vancomycin intermediate Staphylococcus aureus].

Feng NN, Wang Q, Song YL, He LX, Zhou CM, Xie HM, Li HY.

Zhonghua Nei Ke Za Zhi. 2013 Apr;52(4):318-22. Chinese.


Prevalence of rare mitochondrial DNA mutations in mitochondrial disorders.

Bannwarth S, Procaccio V, Lebre AS, Jardel C, Chaussenot A, Hoarau C, Maoulida H, Charrier N, Gai X, Xie HM, Ferre M, Fragaki K, Hardy G, Mousson de Camaret B, Marlin S, Dhaenens CM, Slama A, Rocher C, Paul Bonnefont J, Rötig A, Aoutil N, Gilleron M, Desquiret-Dumas V, Reynier P, Ceresuela J, Jonard L, Devos A, Espil-Taris C, Martinez D, Gaignard P, Le Quan Sang KH, Amati-Bonneau P, Falk MJ, Florentz C, Chabrol B, Durand-Zaleski I, Paquis-Flucklinger V.

J Med Genet. 2013 Oct;50(10):704-14. doi: 10.1136/jmedgenet-2013-101604. Epub 2013 Jul 11.


The prevalence of 16p12.1 microdeletion in patients with left-sided cardiac lesions.

D'Alessandro LC, Werner P, Xie HM, Hakonarson H, White PS, Goldmuntz E.

Congenit Heart Dis. 2014 Jan-Feb;9(1):83-6. doi: 10.1111/chd.12097. Epub 2013 May 20.


Electronic structures and optical properties of the IPR-violating C60X8 (X = H, F, and Cl) fullerene compounds: a computational study.

Tang SW, Wang FD, Zhang NN, Chang YF, Sun H, Zhang JP, Xie HM, Qiu YQ, Wang RS.

Phys Chem Chem Phys. 2012 Dec 21;14(47):16476-85. doi: 10.1039/c2cp42134h. Epub 2012 Nov 7.


Computational study: how redox affect the nonlinear optical properties of donor substituted heteroleptic bis-tridentate Ru(II) complexes?

Sun XX, Ma NN, Li XJ, Sun SL, Xie HM, Qiu YQ.

J Mol Graph Model. 2012 Sep;38:248-55. doi: 10.1016/j.jmgm.2012.07.001. Epub 2012 Aug 18.


Etiology and antimicrobial resistance of community-acquired pneumonia in adult patients in China.

Tao LL, Hu BJ, He LX, Wei L, Xie HM, Wang BQ, Li HY, Chen XH, Zhou CM, Deng WW.

Chin Med J (Engl). 2012 Sep;125(17):2967-72.


Mitochondrial genome sequence analysis: a custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy.

Xie HM, Perin JC, Schurr TG, Dulik MC, Zhadanov SI, Baur JA, King MP, Place E, Clarke C, Grauer M, Schug J, Santani A, Albano A, Kim C, Procaccio V, Hakonarson H, Gai X, Falk MJ.

BMC Bioinformatics. 2011 Oct 19;12:402. doi: 10.1186/1471-2105-12-402.


[Genetic diversity of Legionella pneumophila serogroup 1 in hospital water distribution systems in Shanghai].

Tao LL, Hu BJ, Yu LL, Zhou ZY, Xie HM, Zhou CM.

Zhonghua Jie He He Hu Xi Za Zhi. 2011 Feb;34(2):100-3. Chinese.


Rare structural variation of synapse and neurotransmission genes in autism.

Gai X, Xie HM, Perin JC, Takahashi N, Murphy K, Wenocur AS, D'arcy M, O'Hara RJ, Goldmuntz E, Grice DE, Shaikh TH, Hakonarson H, Buxbaum JD, Elia J, White PS.

Mol Psychiatry. 2012 Apr;17(4):402-11. doi: 10.1038/mp.2011.10. Epub 2011 Mar 1.


Cationic recognition by tert-butylcalix[4]arene-functionalized nanoprobes.

Yan H, Luo J, Xie HM, Xie DX, Su Q, Yin J, Wanjala BN, Diao H, An DL, Zhong CJ.

Phys Chem Chem Phys. 2011 Apr 7;13(13):5824-30. doi: 10.1039/c0cp02658a. Epub 2011 Feb 15.


CNV Workshop: an integrated platform for high-throughput copy number variation discovery and clinical diagnostics.

Gai X, Perin JC, Murphy K, O'Hara R, D'arcy M, Wenocur A, Xie HM, Rappaport EF, Shaikh TH, White PS.

BMC Bioinformatics. 2010 Feb 4;11:74. doi: 10.1186/1471-2105-11-74.

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