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Results: 1 to 20 of 91

1.

Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis.

Fukushima A, Kusano M, Mejia RF, Iwasa M, Kobayashi M, Hayashi N, Watanabe-Takahashi A, Narisawa T, Tohge T, Hur M, Wurtele ES, Nikolau BJ, Saito K.

Plant Physiol. 2014 May 14;165(3):948-961. [Epub ahead of print]

PMID:
24828308
[PubMed - as supplied by publisher]
Free PMC Article
2.

Holocarboxylase synthetase 1 physically interacts with histone h3 in Arabidopsis.

Chen X, Chou HH, Wurtele ES.

Scientifica (Cairo). 2013;2013:983501. doi: 10.1155/2013/983501. Epub 2013 Feb 12.

PMID:
24278788
[PubMed]
Free PMC Article
3.

Automatic extraction of biomolecular interactions: an empirical approach.

Zhang L, Berleant D, Ding J, Wurtele ES.

BMC Bioinformatics. 2013 Jul 24;14:234. doi: 10.1186/1471-2105-14-234.

PMID:
23883165
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Comprehensive analysis of correlation coefficients estimated from pooling heterogeneous microarray data.

Almeida-de-Macedo MM, Ransom N, Feng Y, Hurst J, Wurtele ES.

BMC Bioinformatics. 2013 Jul 4;14:214. doi: 10.1186/1471-2105-14-214.

PMID:
23822712
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Identification and biosynthesis of acylphloroglucinols in Hypericum gentianoides.

Crispin MC, Hur M, Park T, Kim YH, Wurtele ES.

Physiol Plant. 2013 Jul;148(3):354-70. doi: 10.1111/ppl.12063. Epub 2013 May 24.

PMID:
23600727
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A global approach to analysis and interpretation of metabolic data for plant natural product discovery.

Hur M, Campbell AA, Almeida-de-Macedo M, Li L, Ransom N, Jose A, Crispin M, Nikolau BJ, Wurtele ES.

Nat Prod Rep. 2013 Apr;30(4):565-83. doi: 10.1039/c3np20111b. Review.

PMID:
23447050
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Functional identification of valerena-1,10-diene synthase, a terpene synthase catalyzing a unique chemical cascade in the biosynthesis of biologically active sesquiterpenes in Valeriana officinalis.

Yeo YS, Nybo SE, Chittiboyina AG, Weerasooriya AD, Wang YH, Góngora-Castillo E, Vaillancourt B, Buell CR, DellaPenna D, Celiz MD, Jones AD, Wurtele ES, Ransom N, Dudareva N, Shaaban KA, Tibrewal N, Chandra S, Smillie T, Khan IA, Coates RM, Watt DS, Chappell J.

J Biol Chem. 2013 Feb 1;288(5):3163-73. doi: 10.1074/jbc.M112.415836. Epub 2012 Dec 14.

PMID:
23243312
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

MetNet Online: a novel integrated resource for plant systems biology.

Sucaet Y, Wang Y, Li J, Wurtele ES.

BMC Bioinformatics. 2012 Oct 15;13:267. doi: 10.1186/1471-2105-13-267.

PMID:
23066841
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

BirdsEyeView (BEV): graphical overviews of experimental data.

Zhang L, Berleant D, Wang Y, Li L, Cook D, Wurtele ES.

BMC Bioinformatics. 2012;13 Suppl 15:S11. doi: 10.1186/1471-2105-13-S15-S11. Epub 2012 Sep 11.

PMID:
23046276
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of "Unknown Function".

Quanbeck SM, Brachova L, Campbell AA, Guan X, Perera A, He K, Rhee SY, Bais P, Dickerson JA, Dixon P, Wohlgemuth G, Fiehn O, Barkan L, Lange I, Lange BM, Lee I, Cortes D, Salazar C, Shuman J, Shulaev V, Huhman DV, Sumner LW, Roth MR, Welti R, Ilarslan H, Wurtele ES, Nikolau BJ.

Front Plant Sci. 2012 Feb 10;3:15. doi: 10.3389/fpls.2012.00015. eCollection 2012.

PMID:
22645570
[PubMed]
Free PMC Article
11.

Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.

Ngaki MN, Louie GV, Philippe RN, Manning G, Pojer F, Bowman ME, Li L, Larsen E, Wurtele ES, Noel JP.

Nature. 2012 May 13;485(7399):530-3. doi: 10.1038/nature11009.

PMID:
22622584
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Massive human co-expression network and its medical applications.

Feng Y, Hurst J, Almeida-De-Macedo M, Chen X, Li L, Ransom N, Wurtele ES.

Chem Biodivers. 2012 May;9(5):868-87. doi: 10.1002/cbdv.201100355.

PMID:
22589089
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genetic dissection of methylcrotonyl CoA carboxylase indicates a complex role for mitochondrial leucine catabolism during seed development and germination.

Ding G, Che P, Ilarslan H, Wurtele ES, Nikolau BJ.

Plant J. 2012 May;70(4):562-77. doi: 10.1111/j.1365-313X.2011.04893.x. Epub 2012 Feb 6.

PMID:
22211474
[PubMed - indexed for MEDLINE]
14.

Medicinal plants: a public resource for metabolomics and hypothesis development.

Wurtele ES, Chappell J, Jones AD, Celiz MD, Ransom N, Hur M, Rizshsky L, Crispin M, Dixon P, Liu J, P Widrlechner M, Nikolau BJ.

Metabolites. 2012 Nov 21;2(4):1031-59. doi: 10.3390/metabo2041031.

PMID:
24957774
[PubMed]
Free PMC Article
15.

AtRabD2b and AtRabD2c have overlapping functions in pollen development and pollen tube growth.

Peng J, Ilarslan H, Wurtele ES, Bassham DC.

BMC Plant Biol. 2011 Jan 26;11:25. doi: 10.1186/1471-2229-11-25.

PMID:
21269510
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Echinacea-induced cytosolic Ca2+ elevation in HEK293.

Wu L, Rowe EW, Jeftinija K, Jeftinija S, Rizshsky L, Nikolau BJ, McKay J, Kohut M, Wurtele ES.

BMC Complement Altern Med. 2010 Nov 23;10:72. doi: 10.1186/1472-6882-10-72.

PMID:
21092239
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

MetNetAPI: A flexible method to access and manipulate biological network data from MetNet.

Sucaet Y, Wurtele ES.

BMC Res Notes. 2010 Nov 18;3:312. doi: 10.1186/1756-0500-3-312.

PMID:
21083943
[PubMed]
Free PMC Article
18.

Reverse-genetic analysis of the two biotin-containing subunit genes of the heteromeric acetyl-coenzyme A carboxylase in Arabidopsis indicates a unidirectional functional redundancy.

Li X, Ilarslan H, Brachova L, Qian HR, Li L, Che P, Wurtele ES, Nikolau BJ.

Plant Physiol. 2011 Jan;155(1):293-314. doi: 10.1104/pp.110.165910. Epub 2010 Oct 28.

PMID:
21030508
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

MetNetGE: interactive views of biological networks and ontologies.

Jia M, Choi SY, Reiners D, Wurtele ES, Dickerson JA.

BMC Bioinformatics. 2010 Sep 17;11:469. doi: 10.1186/1471-2105-11-469.

PMID:
20849585
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Enrichment of Echinacea angustifolia with Bauer alkylamide 11 and Bauer ketone 23 increased anti-inflammatory potential through interference with cox-2 enzyme activity.

Lalone CA, Huang N, Rizshsky L, Yum MY, Singh N, Hauck C, Nikolau BJ, Wurtele ES, Kohut ML, Murphy PA, Birt DF.

J Agric Food Chem. 2010 Aug 11;58(15):8573-84. doi: 10.1021/jf1014268.

PMID:
20681645
[PubMed - indexed for MEDLINE]
Free PMC Article

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