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Results: 1 to 20 of 194

1.

MetaboAnalyst 3.0-making metabolomics more meaningful.

Xia J, Sinelnikov IV, Han B, Wishart DS.

Nucleic Acids Res. 2015 Apr 20. pii: gkv380. [Epub ahead of print]

2.

The effect of haemolysis on the metabolomic profile of umbilical cord blood.

Denihan NM, Walsh BH, Reinke SN, Sykes BD, Mandal R, Wishart DS, Broadhurst DI, Boylan GB, Murray DM.

Clin Biochem. 2015 Feb 16. pii: S0009-9120(15)00058-2. doi: 10.1016/j.clinbiochem.2015.02.004. [Epub ahead of print]

PMID:
25697106
3.

Recombinant mouse prion protein alone or in combination with lipopolysaccharide alters expression of innate immunity genes in the colon of mice.

Dervishi E, Lam TH, Dunn SM, Zwierzchowski G, Saleem F, Wishart DS, Ametaj BN.

Prion. 2015 Feb 19:0. [Epub ahead of print]

PMID:
25695140
4.

Role of water in ligand binding to maltose-binding protein: insight from a new docking protocol based on the 3D-RISM-KH molecular theory of solvation.

Huang W, Blinov N, Wishart DS, Kovalenko A.

J Chem Inf Model. 2015 Feb 23;55(2):317-28. doi: 10.1021/ci500520q. Epub 2015 Jan 26.

PMID:
25545470
5.

The use of metabolomics in population-based research.

Su LJ, Fiehn O, Maruvada P, Moore SC, O'Keefe SJ, Wishart DS, Zanetti KA.

Adv Nutr. 2014 Nov 14;5(6):785-8. doi: 10.3945/an.114.006494. Print 2014 Nov.

PMID:
25398741
6.

Identifying putative drug targets and potential drug leads: starting points for virtual screening and docking.

Wishart DS.

Methods Mol Biol. 2015;1215:425-44. doi: 10.1007/978-1-4939-1465-4_19.

PMID:
25330974
7.

CSI 2.0: a significantly improved version of the Chemical Shift Index.

Hafsa NE, Wishart DS.

J Biomol NMR. 2014 Nov;60(2-3):131-46. doi: 10.1007/s10858-014-9863-x. Epub 2014 Oct 2.

PMID:
25273503
8.

Salmonella phages and prophages: genomics, taxonomy, and applied aspects.

Switt AI, Sulakvelidze A, Wiedmann M, Kropinski AM, Wishart DS, Poppe C, Liang Y.

Methods Mol Biol. 2015;1225:237-87. doi: 10.1007/978-1-4939-1625-2_15.

PMID:
25253259
9.

Development of isotope labeling liquid chromatography mass spectrometry for mouse urine metabolomics: quantitative metabolomic study of transgenic mice related to Alzheimer's disease.

Peng J, Guo K, Xia J, Zhou J, Yang J, Westaway D, Wishart DS, Li L.

J Proteome Res. 2014 Oct 3;13(10):4457-69. doi: 10.1021/pr500828v. Epub 2014 Sep 15.

PMID:
25164377
10.

Urinary metabolomics for noninvasive detection of borderline and acute T cell-mediated rejection in children after kidney transplantation.

Blydt-Hansen TD, Sharma A, Gibson IW, Mandal R, Wishart DS.

Am J Transplant. 2014 Oct;14(10):2339-49. doi: 10.1111/ajt.12837. Epub 2014 Aug 19.

PMID:
25138024
11.

Hair metabolomics: identification of fetal compromise provides proof of concept for biomarker discovery.

Sulek K, Han TL, Villas-Boas SG, Wishart DS, Soh SE, Kwek K, Gluckman PD, Chong YS, Kenny LC, Baker PN.

Theranostics. 2014 Jul 20;4(9):953-9. doi: 10.7150/thno.9265. eCollection 2014.

12.

In silico studies and fluorescence binding assays of potential anti-prion compounds reveal an important binding site for prion inhibition from PrP(C) to PrP(Sc).

Pagadala NS, Perez-Pineiro R, Wishart DS, Tuszynski JA.

Eur J Med Chem. 2015 Feb 16;91:118-31. doi: 10.1016/j.ejmech.2014.07.045. Epub 2014 Jul 15.

PMID:
25042003
13.

Shaking alone induces de novo conversion of recombinant prion proteins to β-sheet rich oligomers and fibrils.

Ladner-Keay CL, Griffith BJ, Wishart DS.

PLoS One. 2014 Jun 3;9(6):e98753. doi: 10.1371/journal.pone.0098753. eCollection 2014.

14.

Brassica villosa, a system for studying non-glandular trichomes and genes in the Brassicas.

Nayidu NK, Tan Y, Taheri A, Li X, Bjorndahl TC, Nowak J, Wishart DS, Hegedus D, Gruber MY.

Plant Mol Biol. 2014 Jul;85(4-5):519-39. doi: 10.1007/s11103-014-0201-1. Epub 2014 May 16.

PMID:
24831512
15.

Lipopolysaccharide induced conversion of recombinant prion protein.

Saleem F, Bjorndahl TC, Ladner CL, Perez-Pineiro R, Ametaj BN, Wishart DS.

Prion. 2014 Mar-Apr;8(2). pii: 28939. Epub 2014 May 12.

PMID:
24819168
16.

The food metabolome: a window over dietary exposure.

Scalbert A, Brennan L, Manach C, Andres-Lacueva C, Dragsted LO, Draper J, Rappaport SM, van der Hooft JJ, Wishart DS.

Am J Clin Nutr. 2014 Jun;99(6):1286-308. doi: 10.3945/ajcn.113.076133. Epub 2014 Apr 23. Review.

PMID:
24760973
17.

Metabolomic prediction of fetal congenital heart defect in the first trimester.

Bahado-Singh RO, Ertl R, Mandal R, Bjorndahl TC, Syngelaki A, Han B, Dong E, Liu PB, Alpay-Savasan Z, Wishart DS, Nicolaides KH.

Am J Obstet Gynecol. 2014 Sep;211(3):240.e1-240.e14. doi: 10.1016/j.ajog.2014.03.056. Epub 2014 Apr 1.

PMID:
24704061
18.

Identification of predictive biomarkers of disease state in transition dairy cows.

Hailemariam D, Mandal R, Saleem F, Dunn SM, Wishart DS, Ametaj BN.

J Dairy Sci. 2014 May;97(5):2680-93. doi: 10.3168/jds.2013-6803. Epub 2014 Mar 13.

PMID:
24630653
19.

Metabolomic analysis of cold acclimation of Arctic Mesorhizobium sp. strain N33.

Ghobakhlou A, Laberge S, Antoun H, Wishart DS, Xia J, Krishnamurthy R, Mandal R.

PLoS One. 2013 Dec 30;8(12):e84801. doi: 10.1371/journal.pone.0084801. eCollection 2013.

20.

Using isotopically-coded hydrogen peroxide as a surface modification reagent for the structural characterization of prion protein aggregates.

Serpa JJ, Makepeace KA, Borchers TH, Wishart DS, Petrotchenko EV, Borchers CH.

J Proteomics. 2014 Apr 4;100:160-6. doi: 10.1016/j.jprot.2013.11.020. Epub 2013 Dec 3.

PMID:
24316355
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