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Results: 1 to 20 of 313

1.

Genomic characterization of large heterochromatic gaps in the human genome assembly.

Altemose N, Miga KH, Maggioni M, Willard HF.

PLoS Comput Biol. 2014 May 15;10(5):e1003628. doi: 10.1371/journal.pcbi.1003628. eCollection 2014 May.

PMID:
24831296
[PubMed - in process]
Free PMC Article
2.

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.

Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, DeChene ET, Towne MC, Savage SK, Price EN, Holm IA, Luquette LJ, Lyon E, Majzoub J, Neupert P, McCallie D Jr, Szolovits P, Willard HF, Mendelsohn NJ, Temme R, Finkel RS, Yum SW, Medne L, Sunyaev SR, Adzhubey I, Cassa CA, de Bakker PI, Duzkale H, Dworzyński P, Fairbrother W, Francioli L, Funke BH, Giovanni MA, Handsaker RE, Lage K, Lebo MS, Lek M, Leshchiner I, MacArthur DG, McLaughlin HM, Murray MF, Pers TH, Polak PP, Raychaudhuri S, Rehm HL, Soemedi R, Stitziel NO, Vestecka S, Supper J, Gugenmus C, Klocke B, Hahn A, Schubach M, Menzel M, Biskup S, Freisinger P, Deng M, Braun M, Perner S, Smith RJ, Andorf JL, Huang J, Ryckman K, Sheffield VC, Stone EM, Bair T, Black-Ziegelbein EA, Braun TA, Darbro B, DeLuca AP, Kolbe DL, Scheetz TE, Shearer AE, Sompallae R, Wang K, Bassuk AG, Edens E, Mathews K, Moore SA, Shchelochkov OA, Trapane P, Bossler A, Campbell CA, Heusel JW, Kwitek A, Maga T, Panzer K, Wassink T, Van Daele D, Azaiez H, Booth K, Meyer N, Segal MM, Williams MS, Tromp G, White P, Corsmeier D, Fitzgerald-Butt S, Herman G, Lamb-Thrush D, McBride KL, Newsom D, Pierson CR, Rakowsky AT, Maver A, Lovrečić L, Palandačić A, Peterlin B, Torkamani A, Wedell A, Huss M, Alexeyenko A, Lindvall JM, Magnusson M, Nilsson D, Stranneheim H, Taylan F, Gilissen C, Hoischen A, van Bon B, Yntema H, Nelen M, Zhang W, Sager J, Zhang L, Blair K, Kural D, Cariaso M, Lennon GG, Javed A, Agrawal S, Ng PC, Sandhu KS, Krishna S, Veeramachaneni V, Isakov O, Halperin E, Friedman E, Shomron N, Glusman G, Roach JC, Caballero J, Cox HC, Mauldin D, Ament SA, Rowen L, Richards DR, San Lucas FA, Gonzalez-Garay ML, Caskey CT, Bai Y, Huang Y, Fang F, Zhang Y, Wang Z, Barrera J, Garcia-Lobo JM, González-Lamuño D, Llorca J, Rodriguez MC, Varela I, Reese MG, De La Vega FM, Kiruluta E, Cargill M, Hart RK, Sorenson JM, Lyon GJ, Stevenson DA, Bray BE, Moore BM, Eilbeck K, Yandell M, Zhao H, Hou L, Chen X, Yan X, Chen M, Li C, Yang C, Gunel M, Li P, Kong Y, Alexander AC, Albertyn ZI, Boycott KM, Bulman DE, Gordon PM, Innes AM, Knoppers BM, Majewski J, Marshall CR, Parboosingh JS, Sawyer SL, Samuels ME, Schwartzentruber J, Kohane IS, Margulies DM.

Genome Biol. 2014 Mar 25;15(3):R53. doi: 10.1186/gb-2014-15-3-r53.

PMID:
24667040
[PubMed - in process]
Free PMC Article
3.

Impact of delivery models on understanding genomic risk for type 2 diabetes.

Haga SB, Barry WT, Mills R, Svetkey L, Suchindran S, Willard HF, Ginsburg GS.

Public Health Genomics. 2014;17(2):95-104. doi: 10.1159/000358413. Epub 2014 Feb 27.

PMID:
24577154
[PubMed - indexed for MEDLINE]
4.

Centromere reference models for human chromosomes X and Y satellite arrays.

Miga KH, Newton Y, Jain M, Altemose N, Willard HF, Kent WJ.

Genome Res. 2014 Apr;24(4):697-707. doi: 10.1101/gr.159624.113. Epub 2014 Feb 5.

PMID:
24501022
[PubMed - in process]
5.

Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant.

Earnshaw WC, Allshire RC, Black BE, Bloom K, Brinkley BR, Brown W, Cheeseman IM, Choo KH, Copenhaver GP, Deluca JG, Desai A, Diekmann S, Erhardt S, Fitzgerald-Hayes M, Foltz D, Fukagawa T, Gassmann R, Gerlich DW, Glover DM, Gorbsky GJ, Harrison SC, Heun P, Hirota T, Jansen LE, Karpen G, Kops GJ, Lampson MA, Lens SM, Losada A, Luger K, Maiato H, Maddox PS, Margolis RL, Masumoto H, McAinsh AD, Mellone BG, Meraldi P, Musacchio A, Oegema K, O'Neill RJ, Salmon ED, Scott KC, Straight AF, Stukenberg PT, Sullivan BA, Sullivan KF, Sunkel CE, Swedlow JR, Walczak CE, Warburton PE, Westermann S, Willard HF, Wordeman L, Yanagida M, Yen TJ, Yoda K, Cleveland DW.

Chromosome Res. 2013 Apr;21(2):101-6. doi: 10.1007/s10577-013-9347-y. Epub 2013 Apr 12.

PMID:
23580138
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Public knowledge of and attitudes toward genetics and genetic testing.

Haga SB, Barry WT, Mills R, Ginsburg GS, Svetkey L, Sullivan J, Willard HF.

Genet Test Mol Biomarkers. 2013 Apr;17(4):327-35. doi: 10.1089/gtmb.2012.0350. Epub 2013 Feb 13.

PMID:
23406207
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Sequences associated with centromere competency in the human genome.

Hayden KE, Strome ED, Merrett SL, Lee HR, Rudd MK, Willard HF.

Mol Cell Biol. 2013 Feb;33(4):763-72. doi: 10.1128/MCB.01198-12. Epub 2012 Dec 10.

PMID:
23230266
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Nonrandom X chromosome inactivation is influenced by multiple regions on the murine X chromosome.

Thorvaldsen JL, Krapp C, Willard HF, Bartolomei MS.

Genetics. 2012 Nov;192(3):1095-107. doi: 10.1534/genetics.112.144477. Epub 2012 Aug 10.

PMID:
22887817
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Evidence for sequence biases associated with patterns of histone methylation.

Wang Z, Willard HF.

BMC Genomics. 2012 Aug 2;13:367. doi: 10.1186/1471-2164-13-367.

PMID:
22857523
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Composition and organization of active centromere sequences in complex genomes.

Hayden KE, Willard HF.

BMC Genomics. 2012 Jul 20;13:324. doi: 10.1186/1471-2164-13-324.

PMID:
22817545
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Effects of sequence variation on differential allelic transcription factor occupancy and gene expression.

Reddy TE, Gertz J, Pauli F, Kucera KS, Varley KE, Newberry KM, Marinov GK, Mortazavi A, Williams BA, Song L, Crawford GE, Wold B, Willard HF, Myers RM.

Genome Res. 2012 May;22(5):860-9. doi: 10.1101/gr.131201.111. Epub 2012 Feb 2.

PMID:
22300769
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Uncoupling of genomic and epigenetic signals in the maintenance and inheritance of heterochromatin domains in fission yeast.

Wheeler BS, Ruderman BT, Willard HF, Scott KC.

Genetics. 2012 Feb;190(2):549-57. doi: 10.1534/genetics.111.137083. Epub 2011 Dec 5.

PMID:
22143918
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Competencies: a cure for pre-med curriculum.

Anderson WA, Amasino RM, Ares M Jr, Banerjee U, Bartel B, Corces VG, Drennan CL, Elgin SC, Epstein IR, Fanning E, Guillette LJ Jr, Handelsman J, Hatfull GF, Hoy RR, Kelley D, Leinwand LA, Losick R, Lu Y, Lynn DG, Neuhauser C, O'Dowd DK, Olivera T, Pevzner P, Richards-Kortum RR, Rine J, Sah RL, Strobel SA, Walker GC, Walt DR, Warner IM, Wessler S, Willard HF, Zare RN.

Science. 2011 Nov 11;334(6057):760-1. doi: 10.1126/science.334.6057.760-b. No abstract available.

PMID:
22076362
[PubMed - indexed for MEDLINE]
14.

Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation.

Gertz J, Varley KE, Reddy TE, Bowling KM, Pauli F, Parker SL, Kucera KS, Willard HF, Myers RM.

PLoS Genet. 2011 Aug;7(8):e1002228. doi: 10.1371/journal.pgen.1002228. Epub 2011 Aug 11.

PMID:
21852959
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Organization and molecular evolution of CENP-A--associated satellite DNA families in a basal primate genome.

Lee HR, Hayden KE, Willard HF.

Genome Biol Evol. 2011;3:1136-49. doi: 10.1093/gbe/evr083. Epub 2011 Aug 9.

PMID:
21828373
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Allele-specific distribution of RNA polymerase II on female X chromosomes.

Kucera KS, Reddy TE, Pauli F, Gertz J, Logan JE, Myers RM, Willard HF.

Hum Mol Genet. 2011 Oct 15;20(20):3964-73. doi: 10.1093/hmg/ddr315. Epub 2011 Jul 26.

PMID:
21791549
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Comparative analysis of the primate X-inactivation center region and reconstruction of the ancestral primate XIST locus.

Horvath JE, Sheedy CB, Merrett SL, Diallo AB, Swofford DL, NISC Comparative Sequencing Program, Green ED, Willard HF.

Genome Res. 2011 Jun;21(6):850-62. doi: 10.1101/gr.111849.110. Epub 2011 Apr 25.

PMID:
21518738
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

ASHG Awards and Addresses. 2009 William Allan Award address: Life in the sandbox: unfinished business.

Willard HF.

Am J Hum Genet. 2010 Mar 12;86(3):318-27. doi: 10.1016/j.ajhg.2010.01.037. No abstract available.

PMID:
20529654
[PubMed - in process]
Free PMC Article
19.

Considerations for the impact of personal genome information: a study of genomic profiling among genetics and genomics professionals.

O'Daniel JM, Haga SB, Willard HF.

J Genet Couns. 2010 Aug;19(4):387-401. doi: 10.1007/s10897-010-9297-x. Epub 2010 Mar 30.

PMID:
20352309
[PubMed - indexed for MEDLINE]
20.

Heritable individual-specific and allele-specific chromatin signatures in humans.

McDaniell R, Lee BK, Song L, Liu Z, Boyle AP, Erdos MR, Scott LJ, Morken MA, Kucera KS, Battenhouse A, Keefe D, Collins FS, Willard HF, Lieb JD, Furey TS, Crawford GE, Iyer VR, Birney E.

Science. 2010 Apr 9;328(5975):235-9. doi: 10.1126/science.1184655. Epub 2010 Mar 18.

PMID:
20299549
[PubMed - indexed for MEDLINE]
Free PMC Article

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