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Results: 1 to 20 of 100

1.

Limited Utility of Residue Masking for Positive-Selection Inference.

Spielman SJ, Dawson ET, Wilke CO.

Mol Biol Evol. 2014 Jun 3. pii: msu183. [Epub ahead of print]

PMID:
24899665
[PubMed - as supplied by publisher]
2.

Long-term control of viral replication in a Group O, human immunodeficiency virus type 1-infected individual.

Buckheit RW 3rd, Sexauer SB, Sedaghat AR, Wilke CO, Laeyendecker O, Basseth CR, Blankson JN.

AIDS Res Hum Retroviruses. 2014 Jun;30(6):511-3. doi: 10.1089/AID.2014.0054. No abstract available.

PMID:
24798496
[PubMed - in process]
3.

Analyzing machupo virus-receptor binding by molecular dynamics simulations.

Meyer AG, Sawyer SL, Ellington AD, Wilke CO.

PeerJ. 2014 Feb 27;2:e266. doi: 10.7717/peerj.266. eCollection 2014.

PMID:
24624315
[PubMed]
Free PMC Article
4.

Fitting outbreak models to data from many small norovirus outbreaks.

O'Dea EB, Pepin KM, Lopman BA, Wilke CO.

Epidemics. 2014 Mar;6:18-29. doi: 10.1016/j.epidem.2013.12.002. Epub 2014 Jan 8.

PMID:
24593918
[PubMed - in process]
Free Article
5.

Socioeconomic disparities in the presentation of acute bacterial sinusitis complications in children.

Sedaghat AR, Wilke CO, Cunningham MJ, Ishman SL.

Laryngoscope. 2014 Jul;124(7):1700-6. doi: 10.1002/lary.24492. Epub 2013 Dec 11.

PMID:
24338779
[PubMed - in process]
6.

Maximum allowed solvent accessibilites of residues in proteins.

Tien MZ, Meyer AG, Sydykova DK, Spielman SJ, Wilke CO.

PLoS One. 2013 Nov 21;8(11):e80635. doi: 10.1371/journal.pone.0080635. eCollection 2013.

PMID:
24278298
[PubMed - in process]
Free PMC Article
7.

Amino-acid site variability among natural and designed proteins.

Jackson EL, Ollikainen N, Covert AW 3rd, Kortemme T, Wilke CO.

PeerJ. 2013 Nov 12;1:e211. doi: 10.7717/peerj.211. eCollection 2013.

PMID:
24255821
[PubMed]
Free PMC Article
8.

Experiments on the role of deleterious mutations as stepping stones in adaptive evolution.

Covert AW 3rd, Lenski RE, Wilke CO, Ofria C.

Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):E3171-8. doi: 10.1073/pnas.1313424110. Epub 2013 Aug 5.

PMID:
23918358
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

RNaseIII and T4 polynucleotide Kinase sequence biases and solutions during RNA-seq library construction.

Lee C, Harris RA, Wall JK, Mayfield RD, Wilke CO.

Biol Direct. 2013 Jul 4;8:16. doi: 10.1186/1745-6150-8-16.

PMID:
23826734
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

PeptideBuilder: A simple Python library to generate model peptides.

Tien MZ, Sydykova DK, Meyer AG, Wilke CO.

PeerJ. 2013 May 21;1:e80. doi: 10.7717/peerj.80. Print 2013.

PMID:
23717802
[PubMed]
Free PMC Article
11.

Sinonasal anatomic variants and asthma are associated with faster development of chronic rhinosinusitis in patients with allergic rhinitis.

Sedaghat AR, Gray ST, Chambers KJ, Wilke CO, Caradonna DS.

Int Forum Allergy Rhinol. 2013 Sep;3(9):755-61. doi: 10.1002/alr.21163. Epub 2013 Mar 15.

PMID:
23504927
[PubMed - indexed for MEDLINE]
12.

Congruent evolution of fitness and genetic robustness in vesicular stomatitis virus.

Novella IS, Presloid JB, Beech C, Wilke CO.

J Virol. 2013 May;87(9):4923-8. doi: 10.1128/JVI.02796-12. Epub 2013 Feb 13.

PMID:
23408631
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin.

Meyer AG, Dawson ET, Wilke CO.

Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120334. doi: 10.1098/rstb.2012.0334. Print 2013 Mar 19.

PMID:
23382434
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Membrane environment imposes unique selection pressures on transmembrane domains of G protein-coupled receptors.

Spielman SJ, Wilke CO.

J Mol Evol. 2013 Mar;76(3):172-82. doi: 10.1007/s00239-012-9538-8. Epub 2013 Jan 26. Erratum in: J Mol Evol. 2013 Mar;76(3):183.

PMID:
23355009
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The role of environmental factors on the evolution of phenotypic diversity in vesicular stomatitis virus populations.

Smith-Tsurkan SD, Herr RA, Khuder S, Wilke CO, Novella IS.

J Gen Virol. 2013 Apr;94(Pt 4):860-8. doi: 10.1099/vir.0.048082-0. Epub 2012 Dec 12.

PMID:
23239575
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Integrating sequence variation and protein structure to identify sites under selection.

Meyer AG, Wilke CO.

Mol Biol Evol. 2013 Jan;30(1):36-44. doi: 10.1093/molbev/mss217. Epub 2012 Sep 12.

PMID:
22977116
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Modeling coding-sequence evolution within the context of residue solvent accessibility.

Scherrer MP, Meyer AG, Wilke CO.

BMC Evol Biol. 2012 Sep 12;12:179. doi: 10.1186/1471-2148-12-179.

PMID:
22967129
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Bringing molecules back into molecular evolution.

Wilke CO.

PLoS Comput Biol. 2012;8(6):e1002572. doi: 10.1371/journal.pcbi.1002572. Epub 2012 Jun 28. Review.

PMID:
22761562
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Interactions between evolutionary processes at high mutation rates.

Keller TE, Wilke CO, Bull JJ.

Evolution. 2012 Jul;66(7):2303-14. doi: 10.1111/j.1558-5646.2012.01596.x. Epub 2012 Mar 19.

PMID:
22759303
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Risk factors for development of chronic rhinosinusitis in patients with allergic rhinitis.

Sedaghat AR, Gray ST, Wilke CO, Caradonna DS.

Int Forum Allergy Rhinol. 2012 Sep-Oct;2(5):370-5. doi: 10.1002/alr.21055. Epub 2012 May 30.

PMID:
22648994
[PubMed - indexed for MEDLINE]

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