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Results: 1 to 20 of 125

1.

Open questions: the disrupted circuitry of the cancer cell.

Wiley HS.

BMC Biol. 2014 Oct 18;12:88. doi: 10.1186/s12915-014-0088-y. No abstract available.

PMID:
25335688
[PubMed - in process]
Free PMC Article
2.

Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria.

Taylor RC, Webb Robertson BJ, Markillie LM, Serres MH, Linggi BE, Aldrich JT, Hill EA, Romine MF, Lipton MS, Wiley HS.

Integr Biol (Camb). 2013 Nov;5(11):1393-406. doi: 10.1039/c3ib40120k. Epub 2013 Sep 30.

PMID:
24081429
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Autocrine HBEGF expression promotes breast cancer intravasation, metastasis and macrophage-independent invasion in vivo.

Zhou ZN, Sharma VP, Beaty BT, Roh-Johnson M, Peterson EA, Van Rooijen N, Kenny PA, Wiley HS, Condeelis JS, Segall JE.

Oncogene. 2014 Jul 17;33(29):3784-93. doi: 10.1038/onc.2013.363. Epub 2013 Sep 9.

PMID:
24013225
[PubMed - indexed for MEDLINE]
4.

Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics.

Hess BM, Xue J, Markillie LM, Taylor RC, Wiley HS, Ahring BK, Linggi B.

PLoS One. 2013 Jun 19;8(6):e66104. Print 2013.

PMID:
23840410
[PubMed - as supplied by publisher]
Free PMC Article
5.

Integrated experimental and model-based analysis reveals the spatial aspects of EGFR activation dynamics.

Shankaran H, Zhang Y, Chrisler WB, Ewald JA, Wiley HS, Resat H.

Mol Biosyst. 2012 Nov;8(11):2868-82. doi: 10.1039/c2mb25190f. Epub 2012 Sep 5.

PMID:
22952062
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Improving RNA-Seq Precision with MapAl.

Labaj PP, Linggi BE, Wiley HS, Kreil DP.

Front Genet. 2012 Apr 2;3:28. doi: 10.3389/fgene.2012.00028. eCollection 2012.

PMID:
22485116
[PubMed]
Free PMC Article
7.

Network analysis of epidermal growth factor signaling using integrated genomic, proteomic and phosphorylation data.

Waters KM, Liu T, Quesenberry RD, Willse AR, Bandyopadhyay S, Kathmann LE, Weber TJ, Smith RD, Wiley HS, Thrall BD.

PLoS One. 2012;7(3):e34515. doi: 10.1371/journal.pone.0034515. Epub 2012 Mar 29.

PMID:
22479638
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling.

Łabaj PP, Leparc GG, Linggi BE, Markillie LM, Wiley HS, Kreil DP.

Bioinformatics. 2011 Jul 1;27(13):i383-91. doi: 10.1093/bioinformatics/btr247.

PMID:
21685096
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Integrating multiple types of data for signaling research: challenges and opportunities.

Wiley HS.

Sci Signal. 2011 Feb 15;4(160):pe9. doi: 10.1126/scisignal.2001826.

PMID:
21325205
[PubMed - indexed for MEDLINE]
10.

Oscillatory dynamics of the extracellular signal-regulated kinase pathway.

Shankaran H, Wiley HS.

Curr Opin Genet Dev. 2010 Dec;20(6):650-5. doi: 10.1016/j.gde.2010.08.002. Review.

PMID:
20810275
[PubMed - indexed for MEDLINE]
11.

The heparin-binding domain of HB-EGF mediates localization to sites of cell-cell contact and prevents HB-EGF proteolytic release.

Prince RN, Schreiter ER, Zou P, Wiley HS, Ting AY, Lee RT, Lauffenburger DA.

J Cell Sci. 2010 Jul 1;123(Pt 13):2308-18. doi: 10.1242/jcs.058321. Epub 2010 Jun 8.

PMID:
20530570
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Structure of the EGF receptor transactivation circuit integrates multiple signals with cell context.

Joslin EJ, Shankaran H, Opresko LK, Bollinger N, Lauffenburger DA, Wiley HS.

Mol Biosyst. 2010 Jul;6(7):1293-306. doi: 10.1039/c003921g. Epub 2010 May 10.

PMID:
20458382
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

An analysis pipeline for the inference of protein-protein interaction networks.

Taylor RC, Singhal M, Daly DS, Gilmore J, Cannon WR, Domico K, White AM, Auberry DL, Auberry KJ, Hooker BS, Hurst G, McDermott JE, McDonald WH, Pelletier DA, Schmoyer D, Wiley HS.

Int J Data Min Bioinform. 2009;3(4):409-30.

PMID:
20052905
[PubMed - indexed for MEDLINE]
14.

Basic fibroblast growth factor regulates persistent ERK oscillations in premalignant but not malignant JB6 cells.

Weber TJ, Shankaran H, Wiley HS, Opresko LK, Chrisler WB, Quesenberry RD.

J Invest Dermatol. 2010 May;130(5):1444-56. doi: 10.1038/jid.2009.383. Epub 2009 Dec 17.

PMID:
20016498
[PubMed - indexed for MEDLINE]
Free Article
15.

Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor.

Shankaran H, Ippolito DL, Chrisler WB, Resat H, Bollinger N, Opresko LK, Wiley HS.

Mol Syst Biol. 2009;5:332. doi: 10.1038/msb.2009.90. Epub 2009 Dec 1.

PMID:
19953086
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

HER/ErbB receptor interactions and signaling patterns in human mammary epithelial cells.

Zhang Y, Opresko L, Shankaran H, Chrisler WB, Wiley HS, Resat H.

BMC Cell Biol. 2009 Oct 31;10:78. doi: 10.1186/1471-2121-10-78.

PMID:
19878579
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An extensive survey of tyrosine phosphorylation revealing new sites in human mammary epithelial cells.

Heibeck TH, Ding SJ, Opresko LK, Zhao R, Schepmoes AA, Yang F, Tolmachev AV, Monroe ME, Camp DG 2nd, Smith RD, Wiley HS, Qian WJ.

J Proteome Res. 2009 Aug;8(8):3852-61. doi: 10.1021/pr900044c.

PMID:
19534553
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models.

Rogers S, Girolami M, Kolch W, Waters KM, Liu T, Thrall B, Wiley HS.

Bioinformatics. 2008 Dec 15;24(24):2894-900. doi: 10.1093/bioinformatics/btn553. Epub 2008 Oct 30.

PMID:
18974169
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Multiple mechanisms are responsible for transactivation of the epidermal growth factor receptor in mammary epithelial cells.

Rodland KD, Bollinger N, Ippolito D, Opresko LK, Coffey RJ, Zangar R, Wiley HS.

J Biol Chem. 2008 Nov 14;283(46):31477-87. doi: 10.1074/jbc.M800456200. Epub 2008 Sep 9.

PMID:
18782770
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Smad signaling dynamics: insights from a parsimonious model.

Shankaran H, Wiley HS.

Sci Signal. 2008 Sep 9;1(36):pe41. doi: 10.1126/scisignal.136pe41.

PMID:
18780891
[PubMed - indexed for MEDLINE]

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