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Results: 1 to 20 of 29

1.

The Arabidopsis GAGA-Binding Factor BASIC PENTACYSTEINE6 Recruits the POLYCOMB-REPRESSIVE COMPLEX1 Component LIKE HETEROCHROMATIN PROTEIN1 to GAGA DNA Motifs.

Hecker A, Brand LH, Peter S, Simoncello N, Kilian J, Harter K, Gaudin V, Wanke D.

Plant Physiol. 2015 Jul;168(3):1013-24. doi: 10.1104/pp.15.00409. Epub 2015 May 29.

PMID:
26025051
2.

The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.

Soyk S, Simková K, Zürcher E, Luginbühl L, Brand LH, Vaughan CK, Wanke D, Zeeman SC.

Plant Cell. 2014 Apr 18;26(4):1746-1763. [Epub ahead of print]

3.

TFpredict and SABINE: sequence-based prediction of structural and functional characteristics of transcription factors.

Eichner J, Topf F, Dräger A, Wrzodek C, Wanke D, Zell A.

PLoS One. 2013 Dec 12;8(12):e82238. doi: 10.1371/journal.pone.0082238. eCollection 2013.

4.

Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA.

Brand LH, Henneges C, Schüssler A, Kolukisaoglu HÜ, Koch G, Wallmeroth N, Hecker A, Thurow K, Zell A, Harter K, Wanke D.

PLoS One. 2013 Oct 11;8(10):e75177. doi: 10.1371/journal.pone.0075177. eCollection 2013. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/57c9046c-1549-445c-8733-d0b2cccc5bb9. PLoS One. 2014;9(1). doi:10.1371/annotation/25496321-a034-46b0-90e4-5af462e8f068.

5.

Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays.

Brand LH, Fischer NM, Harter K, Kohlbacher O, Wanke D.

Nucleic Acids Res. 2013 Nov;41(21):9764-78. doi: 10.1093/nar/gkt732. Epub 2013 Aug 23.

6.

Plant core environmental stress response genes are systemically coordinated during abiotic stresses.

Hahn A, Kilian J, Mohrholz A, Ladwig F, Peschke F, Dautel R, Harter K, Berendzen KW, Wanke D.

Int J Mol Sci. 2013 Apr 8;14(4):7617-41. doi: 10.3390/ijms14047617.

7.

Bioinformatic cis-element analyses performed in Arabidopsis and rice disclose bZIP- and MYB-related binding sites as potential AuxRE-coupling elements in auxin-mediated transcription.

Berendzen KW, Weiste C, Wanke D, Kilian J, Harter K, Dröge-Laser W.

BMC Plant Biol. 2012 Aug 1;12:125. doi: 10.1186/1471-2229-12-125.

8.

Volatiles of two growth-inhibiting rhizobacteria commonly engage AtWRKY18 function.

Wenke K, Wanke D, Kilian J, Berendzen K, Harter K, Piechulla B.

Plant J. 2012 May;70(3):445-59. doi: 10.1111/j.1365-313X.2011.04891.x. Epub 2012 Feb 14.

PMID:
22188129
9.

The SCO2 protein disulphide isomerase is required for thylakoid biogenesis and interacts with LHCB1 chlorophyll a/b binding proteins which affects chlorophyll biosynthesis in Arabidopsis seedlings.

Tanz SK, Kilian J, Johnsson C, Apel K, Small I, Harter K, Wanke D, Pogson B, Albrecht V.

Plant J. 2012 Mar;69(5):743-54. doi: 10.1111/j.1365-313X.2011.04833.x. Epub 2011 Dec 2.

PMID:
22040291
10.

Prerequisites, performance and profits of transcriptional profiling the abiotic stress response.

Kilian J, Peschke F, Berendzen KW, Harter K, Wanke D.

Biochim Biophys Acta. 2012 Feb;1819(2):166-75. doi: 10.1016/j.bbagrm.2011.09.005. Epub 2011 Oct 6. Review.

PMID:
22001611
11.

The ABA-mediated switch between submersed and emersed life-styles in aquatic macrophytes.

Wanke D.

J Plant Res. 2011 Jul;124(4):467-75. doi: 10.1007/s10265-011-0434-x. Epub 2011 Jun 15. Review.

PMID:
21674229
12.

Alanine zipper-like coiled-coil domains are necessary for homotypic dimerization of plant GAGA-factors in the nucleus and nucleolus.

Wanke D, Hohenstatt ML, Dynowski M, Bloss U, Hecker A, Elgass K, Hummel S, Hahn A, Caesar K, Schleifenbaum F, Harter K, Berendzen KW.

PLoS One. 2011 Feb 10;6(2):e16070. doi: 10.1371/journal.pone.0016070.

13.

Predicting DNA-binding specificities of eukaryotic transcription factors.

Schröder A, Eichner J, Supper J, Eichner J, Wanke D, Henneges C, Zell A.

PLoS One. 2010 Nov 30;5(11):e13876. doi: 10.1371/journal.pone.0013876.

14.

DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro.

Brand LH, Kirchler T, Hummel S, Chaban C, Wanke D.

Plant Methods. 2010 Nov 25;6:25. doi: 10.1186/1746-4811-6-25.

15.

Transcriptome analysis of high-temperature stress in developing barley caryopses: early stress responses and effects on storage compound biosynthesis.

Mangelsen E, Kilian J, Harter K, Jansson C, Wanke D, Sundberg E.

Mol Plant. 2011 Jan;4(1):97-115. doi: 10.1093/mp/ssq058. Epub 2010 Oct 5.

16.

Application of FLIM-FIDSAM for the in vivo analysis of hormone competence of different cell types.

Elgass K, Caesar K, Wanke D, Harter K, Meixner AJ, Schleifenbaum F.

Anal Bioanal Chem. 2010 Nov;398(5):1919-25. doi: 10.1007/s00216-010-4127-4. Epub 2010 Sep 2.

PMID:
20811880
17.

An update on the ABCC transporter family in plants: many genes, many proteins, but how many functions?

Wanke D, Kolukisaoglu HU.

Plant Biol (Stuttg). 2010 Sep;12 Suppl 1:15-25. doi: 10.1111/j.1438-8677.2010.00380.x. Review.

PMID:
20712617
18.

Significance of light, sugar, and amino acid supply for diurnal gene regulation in developing barley caryopses.

Mangelsen E, Wanke D, Kilian J, Sundberg E, Harter K, Jansson C.

Plant Physiol. 2010 May;153(1):14-33. doi: 10.1104/pp.110.154856. Epub 2010 Mar 19.

19.

ModuleMaster: a new tool to decipher transcriptional regulatory networks.

Wrzodek C, Schröder A, Dräger A, Wanke D, Berendzen KW, Kronfeld M, Harter K, Zell A.

Biosystems. 2010 Jan;99(1):79-81. doi: 10.1016/j.biosystems.2009.09.005. Epub 2009 Oct 9.

PMID:
19819296
20.

Analysis of plant regulatory DNA sequences by the yeast-one-hybrid assay.

Wanke D, Harter K.

Methods Mol Biol. 2009;479:291-309. doi: 10.1007/978-1-59745-289-2_19.

PMID:
19083180
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