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Results: 1 to 20 of 26

1.

Identification of candidate genes and molecular markers for heat-induced brown discoloration of seed coats in cowpea [Vigna unguiculata (L.) Walp].

Pottorff M, Roberts PA, Close TJ, Lonardi S, Wanamaker S, Ehlers JD.

BMC Genomics. 2014 May 1;15:328. doi: 10.1186/1471-2164-15-328.

PMID:
24885083
[PubMed - in process]
Free PMC Article
2.

Combinatorial pooling enables selective sequencing of the barley gene space.

Lonardi S, Duma D, Alpert M, Cordero F, Beccuti M, Bhat PR, Wu Y, Ciardo G, Alsaihati B, Ma Y, Wanamaker S, Resnik J, Bozdag S, Luo MC, Close TJ.

PLoS Comput Biol. 2013 Apr;9(4):e1003010. doi: 10.1371/journal.pcbi.1003010. Epub 2013 Apr 4.

PMID:
23592960
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genetic and physical mapping of candidate genes for resistance to Fusarium oxysporum f.sp. tracheiphilum race 3 in cowpea [Vigna unguiculata (L.) Walp].

Pottorff M, Wanamaker S, Ma YQ, Ehlers JD, Roberts PA, Close TJ.

PLoS One. 2012;7(7):e41600. doi: 10.1371/journal.pone.0041600. Epub 2012 Jul 31.

PMID:
22860000
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins.

Rozenblatt-Rosen O, Deo RC, Padi M, Adelmant G, Calderwood MA, Rolland T, Grace M, Dricot A, Askenazi M, Tavares M, Pevzner SJ, Abderazzaq F, Byrdsong D, Carvunis AR, Chen AA, Cheng J, Correll M, Duarte M, Fan C, Feltkamp MC, Ficarro SB, Franchi R, Garg BK, Gulbahce N, Hao T, Holthaus AM, James R, Korkhin A, Litovchick L, Mar JC, Pak TR, Rabello S, Rubio R, Shen Y, Singh S, Spangle JM, Tasan M, Wanamaker S, Webber JT, Roecklein-Canfield J, Johannsen E, Barabási AL, Beroukhim R, Kieff E, Cusick ME, Hill DE, Münger K, Marto JA, Quackenbush J, Roth FP, DeCaprio JA, Vidal M.

Nature. 2012 Jul 26;487(7408):491-5. doi: 10.1038/nature11288.

PMID:
22810586
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

ParentChecker: a computer program for automated inference of missing parental genotype calls and linkage phase correction.

Hu Z, Ehlers JD, Roberts PA, Close TJ, Lucas MR, Wanamaker S, Xu S.

BMC Genet. 2012 Feb 23;13:9. doi: 10.1186/1471-2156-13-9.

PMID:
22360875
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava.

Ferguson ME, Hearne SJ, Close TJ, Wanamaker S, Moskal WA, Town CD, de Young J, Marri PR, Rabbi IY, de Villiers EP.

Theor Appl Genet. 2012 Mar;124(4):685-95. doi: 10.1007/s00122-011-1739-9. Epub 2011 Nov 9.

PMID:
22069119
[PubMed - indexed for MEDLINE]
7.

Development and implementation of high-throughput SNP genotyping in barley.

Close TJ, Bhat PR, Lonardi S, Wu Y, Rostoks N, Ramsay L, Druka A, Stein N, Svensson JT, Wanamaker S, Bozdag S, Roose ML, Moscou MJ, Chao S, Varshney RK, Szucs P, Sato K, Hayes PM, Matthews DE, Kleinhofs A, Muehlbauer GJ, DeYoung J, Marshall DF, Madishetty K, Fenton RD, Condamine P, Graner A, Waugh R.

BMC Genomics. 2009 Dec 4;10:582. doi: 10.1186/1471-2164-10-582.

PMID:
19961604
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs.

Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ.

Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18159-64. doi: 10.1073/pnas.0905886106. Epub 2009 Oct 13.

PMID:
19826088
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Detection and validation of single feature polymorphisms using RNA expression data from a rice genome array.

Kim SH, Bhat PR, Cui X, Walia H, Xu J, Wanamaker S, Ismail AM, Wilson C, Close TJ.

BMC Plant Biol. 2009 May 29;9:65. doi: 10.1186/1471-2229-9-65.

PMID:
19480680
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Dehydrin gene expression provides an indicator of low temperature and drought stress: transcriptome-based analysis of barley (Hordeum vulgare L.).

Tommasini L, Svensson JT, Rodriguez EM, Wahid A, Malatrasi M, Kato K, Wanamaker S, Resnik J, Close TJ.

Funct Integr Genomics. 2008 Nov;8(4):387-405. doi: 10.1007/s10142-008-0081-z. Epub 2008 May 30.

PMID:
18512091
[PubMed - indexed for MEDLINE]
11.

Detection and validation of single feature polymorphisms in cowpea (Vigna unguiculata L. Walp) using a soybean genome array.

Das S, Bhat PR, Sudhakar C, Ehlers JD, Wanamaker S, Roberts PA, Cui X, Close TJ.

BMC Genomics. 2008 Feb 28;9:107. doi: 10.1186/1471-2164-9-107.

PMID:
18307807
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

HarvEST.

Close TJ, Wanamaker S, Roose ML, Lyon M.

Methods Mol Biol. 2007;406:161-77. No abstract available.

PMID:
18287692
[PubMed - indexed for MEDLINE]
13.

Mapping translocation breakpoints using a wheat microarray.

Bhat PR, Lukaszewski A, Cui X, Xu J, Svensson JT, Wanamaker S, Waines JG, Close TJ.

Nucleic Acids Res. 2007;35(9):2936-43. Epub 2007 Apr 16.

PMID:
17439961
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress.

Rostoks N, Mudie S, Cardle L, Russell J, Ramsay L, Booth A, Svensson JT, Wanamaker SI, Walia H, Rodriguez EM, Hedley PE, Liu H, Morris J, Close TJ, Marshall DF, Waugh R.

Mol Genet Genomics. 2005 Dec;274(5):515-27. Epub 2005 Oct 22.

PMID:
16244872
[PubMed - indexed for MEDLINE]
15.

Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage.

Walia H, Wilson C, Condamine P, Liu X, Ismail AM, Zeng L, Wanamaker SI, Mandal J, Xu J, Cui X, Close TJ.

Plant Physiol. 2005 Oct;139(2):822-35. Epub 2005 Sep 23.

PMID:
16183841
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Detecting single-feature polymorphisms using oligonucleotide arrays and robustified projection pursuit.

Cui X, Xu J, Asghar R, Condamine P, Svensson JT, Wanamaker S, Stein N, Roose M, Close TJ.

Bioinformatics. 2005 Oct 15;21(20):3852-8. Epub 2005 Aug 23.

PMID:
16118260
[PubMed - indexed for MEDLINE]
Free Article
17.

Construction and evaluation of cDNA libraries for large-scale expressed sequence tag sequencing in wheat (Triticum aestivum L.).

Zhang D, Choi DW, Wanamaker S, Fenton RD, Chin A, Malatrasi M, Turuspekov Y, Walia H, Akhunov ED, Kianian P, Otto C, Simons K, Deal KR, Echenique V, Stamova B, Ross K, Butler GE, Strader L, Verhey SD, Johnson R, Altenbach S, Kothari K, Tanaka C, Shah MM, Laudencia-Chingcuanco D, Han P, Miller RE, Crossman CC, Chao S, Lazo GR, Klueva N, Gustafson JP, Kianian SF, Dubcovsky J, Walker-Simmons MK, Gill KS, Dvorák J, Anderson OD, Sorrells ME, McGuire PE, Qualset CO, Nguyen HT, Close TJ.

Genetics. 2004 Oct;168(2):595-608.

PMID:
15514038
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A new resource for cereal genomics: 22K barley GeneChip comes of age.

Close TJ, Wanamaker SI, Caldo RA, Turner SM, Ashlock DA, Dickerson JA, Wing RA, Muehlbauer GJ, Kleinhofs A, Wise RP.

Plant Physiol. 2004 Mar;134(3):960-8.

PMID:
15020760
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Ultrasound evaluation of blunt abdominal trauma: program implementation, initial experience, and learning curve.

Thomas B, Falcone RE, Vasquez D, Santanello S, Townsend M, Hockenberry S, Innes J, Wanamaker S.

J Trauma. 1997 Mar;42(3):384-8; discussion 388-90.

PMID:
9095104
[PubMed - indexed for MEDLINE]
20.

Laparoscopic vs. open wedge biopsy of the liver.

Falcone RE, Wanamaker SR, Barnes F, Baxter CG, Santanello SA.

J Laparoendosc Surg. 1993 Aug;3(4):325-9.

PMID:
8268501
[PubMed - indexed for MEDLINE]

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